Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00338 ATGACAATCACGACCCATTTGGAAACCCCTTTCCTAGTTCATGTCAAGGACGTTATCCTTGTTACACCATCAAAACCAACACCAAATGCCATCCTTCCTCTGTCGACCGTCGACAGTGATTATATACTTGACGTGCCCGCATACATTGTTCGAGTTTACAAGGGAAGATTGGATCCAGAACTGAATCCAGCTGATGTGATAAGAGAAGCTCTCTCTAAGGCTTTGGTCTATTACTACCCACTGGCAGGCAAGCTCAAACGCCAAGAGTACAATGGAAGATTCTACGTTAACTGCAACACAGTTGGTGTGCCATTTGTGGTGGCATCAGCTAATTGTAAGCTATCCGATGTCAATCACATTGATGGGGCAGATGTTGGATATGCAAAAGACTTGGTTTGCGATTTTCCACCAGAAGATGACACTGGAATGCATTCTATGGTTCTGCAAGTGACAACATTTCTATGTGGGGGTTTTACAATTGGAATTGGCGTATGGCATGCTATCTGCGATGGAACTGGCACGGTTCAAATAGCAAACGCACTTACTGAGCTTGCAAGCGGGATGAGTGAGCCCTCAGTGATGCCTGTGTGGGAGAGGGAAAGACTAAATGGTTCCGTTTTGAAGGAACCAGTTGATCAGTTTCCATTGGATCCAGCTGCTGCAGCAGTTTCGCCGTATTTGCCAGCAACAGATCTCGTGTTGCAGAGTTTTCATGTCGATAAAATGAGTCTAAGGAATCTTAAAATCAGTTTGATGAAGGAAAGTGGGGATCCTACATTGAAGGAGAGCAGCTTCACAACTTTTGAAGCCCTTGGTGCATATTTATGGCGATCGAGATGCAAAGCTTTGAAATTGAATGCAGAAGGTGAAACAATGCTAGTGATGATAGTTGGAATAAGGGAACATATGCATCCTCCATTGCCTATGGGCTATTATGGAAACGGATGCGTACCGGCTTACCATGTGATGAAAGTAAAGGATGTAGTTGGAGGATCACTTTTAAATGTTGTGAAGCATATCAAGGAGTTGAAACACCATGCTCGCAGTAATGTTGAATTCATGAGGAACGCACTCAATTATTCAGAAACAAGAAGACGACTAGAAATTCATCCTGAAACATATCAAGATGGACTTGTCGCTATTGTAGACTGGAGGCAGCTGGGAGCTATGCAAGAAGTGGACTTTGGATGGGGAAGATCAGTAAATTGGGTTACAGCGGCAAAAAACTTGCTGGACGATCTCGACATATCTATCATCGCACCACCTTCTTCTGTACATCCATCCATGGGAGATGGAGTAAGAGTTTTAGCCATACTCCCCACGGCATGCATGAGAACATTCAAAGGGGAACTTGATGCCTTGAGAGTTGAGAGACAGCCATGCAGTGAACAAGAAATTTAG 1401 0.4404 MTITTHLETPFLVHVKDVILVTPSKPTPNAILPLSTVDSDYILDVPAYIVRVYKGRLDPELNPADVIREALSKALVYYYPLAGKLKRQEYNGRFYVNCNTVGVPFVVASANCKLSDVNHIDGADVGYAKDLVCDFPPEDDTGMHSMVLQVTTFLCGGFTIGIGVWHAICDGTGTVQIANALTELASGMSEPSVMPVWERERLNGSVLKEPVDQFPLDPAAAAVSPYLPATDLVLQSFHVDKMSLRNLKISLMKESGDPTLKESSFTTFEALGAYLWRSRCKALKLNAEGETMLVMIVGIREHMHPPLPMGYYGNGCVPAYHVMKVKDVVGGSLLNVVKHIKELKHHARSNVEFMRNALNYSETRRRLEIHPETYQDGLVAIVDWRQLGAMQEVDFGWGRSVNWVTAAKNLLDDLDISIIAPPSSVHPSMGDGVRVLAILPTACMRTFKGELDALRVERQPCSEQEI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00338 466 Gene3D - 9 211 IPR023213 -
Pte12g00338 466 Gene3D - 228 449 IPR023213 -
Pte12g00338 466 Pfam Transferase family 14 451 - -
Pte12g00338 466 PANTHER ACYL TRANSFERASE 4 11 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00338 Pte-Chr12 2815714 2817114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00338 13 401 Monolignol Biosynthesis Gene Families AT5G48930 29.684 2.75e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00338 K20240 - gmx:100801843 417.157