Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00324 ATGAGTTCACAAAGTGCAGGTCTCCATTTATGGTGGGTGATTTGTGCACTCAATTTTCTTGCATACAAAACACTTGGGCTGAACACTGATGGCTTCCTGTTGCTTTCTTTCAAACACTCAATTCTCAGCGATCCTCTCCGCGTGCTTGAAAGTTGGAATCACACACATGAGACTCCATGTTCATGGAAAGGAATTAGATGTGCAGAAACAACAACTGCAGCCCTGAAAGACAAAGTTGCTCGTGTAATTGGGTTAGCACTCCCAAATTCTCAGCTTCAAGGTTCAATTCCTCCATACTTGGGTTACATCGAATACCTCCAAAGTCTGGATCTTTCTAACAATTCATTCAACGGGTCTCTTCCAAATTCTCTTTTCAATGCCACTGATCTTCGTTTTCTTGATTTTTCCAACAATTGGATCTCAGGGGAGATCCCGAACTCCATAGAAAAACTCAAGAATCTTCAGTATCTGAACCTCTCTGGCAATGCCTTGGTGGGAAATGTGCCTGCCAATCTCACTGCTATGCAAAATCTTACAGTTGTTTCATTGAAGAACAACTACTTGACTGGTAATCTTCCTGGTGGATTTGAAGCAGTGAAAGTGTTAGATTTATCTTCCAATCTCATCAATGGATCTTTGCCTCCAGATTTCGGTGGATCTAGTTTACGCTACTTGAATATATCTTACAACAGTCTTTCCGGAGAAATCCGACCAGAATTTGCAGAGAAAATCCCAGCCAACTCCACCATTGACATCTCCTTCAACAGTCTAACTGGCGCAATTCCATATTCCATGGTTTTCATGAATCAAGATTCCCAATCTTTCTCTGGGAACCCTTACCTCTGTGGACGGCCATCAAGAAATCCATGTCATGTTGCTTATTCGCCATCCGCTTCACTAAATGCCTCTAGTCCAACGTCACCACCTGCATTTGCTGCAATTCCAGAGACACAAGATTCGCAGGCAGATACAAATACGACCAATTTAGAAGTATTAGGAACTGAGTCTCACCCAAAAAAACTTACTTTTCTTAGACCTGAAACTATTATAGGAATCATAGTTGGAGATTTAGTAGGTATCGGAATATTGGCGTTGATTTTCTTGTACGTTTATGGATCAAAGAGAAAGAAGAACGTAGAGAATGCATTGAAGCAGGAAGCTGCCACAGAAAATAGTGATGTCTCATCTTCAACCACTGACCTGAGAGGGTTCACAAGATGGGCGTGCTTGCGAAAAAGAAATGAAAATGGAGAGAATTCTGAAACTACTAGCTCTATCGACGACGAAGTAGAAGAACCATTCGCTCAGAACTCCCATGAAAATCAACGGCAACAAGAGCCCGAACAGAGCAAAGAAGGTACATTGGTAACTGTTGATGGAGATAAAGAGCTTGAGCTTGAAACATTGCTCAAGGCATCAGCTTACATATTGGGTGCCACTGGTTCGAGCATAATGTATAAAGCCGTGCTTGAAGATGGTACAGCATTAGCAGTTCGTAGAATAGGTGAGAACAATGTAGAGAGGTTCAAGGAATTCGAAAACCAGGTCCGCACCATTGCAAAACTGGTTCACCCCAATCTGGTTCGCGTTCGTGGTTTCTACTGGGGTCTCGATGAAAAGCTCATCATCTATGACTTCGTTCCCAACGGCAGCCTCGCTAATGCCCGTCACAGGAAGATGGGTACCTCTCCTAGTGGCCATCTGCCATGGGAGGTACGGCTCAAGATAGCGAGGGGTATGGCACGTGGTCTGGCTTACCTTCACGAGAAGAAGCATGTGCATGGGAATTTGAAACCGAGCAATGTTCTCTTGGGTAGTGCTATGGAGCCCAAAATAAGGGACTTTGGGCTTGAGAGACTTATAGCGGGAGACATGATCTACAAATCGAGAGATTCTGCCCGAAACTTTGGCAGCAAGAGATCTACAGCTTCACGTGACAGTTTGCATGAGATTTCGCTTGGGCCCAGTCCAAGCCCAAGCCCAAGTGCAATGAGCGGCGTCTCATCCTACCATGCACCAGAATCGTTAAGAAGCATAAAGCCCAACCCAAAGTGGGATGTCTACTCGTTTGGAATGATATTTCTCGAGCTTTTAACTGGGAAAGCCGTATCTTTAGATGAAATGGGTCTAGCAAATGGACTTTTGGTTGAAGACAAGGCCCGCGCTTTACGAATGGCTGATGTGGCAATTCGAGCTGACATGGAGGGCAAAGAGGAGTCCTTGTTGGCATGCTTCAAGTTAGGGTATAGTTGTGTCACTCCCTTGCCACAAAAAAGGCCATCCATGAAAGAGGTTCTACATGTTCTTGATAAGATTCCTTCAACGTCCTACGTATATGCTCACTAG 2346 0.4429 MSSQSAGLHLWWVICALNFLAYKTLGLNTDGFLLLSFKHSILSDPLRVLESWNHTHETPCSWKGIRCAETTTAALKDKVARVIGLALPNSQLQGSIPPYLGYIEYLQSLDLSNNSFNGSLPNSLFNATDLRFLDFSNNWISGEIPNSIEKLKNLQYLNLSGNALVGNVPANLTAMQNLTVVSLKNNYLTGNLPGGFEAVKVLDLSSNLINGSLPPDFGGSSLRYLNISYNSLSGEIRPEFAEKIPANSTIDISFNSLTGAIPYSMVFMNQDSQSFSGNPYLCGRPSRNPCHVAYSPSASLNASSPTSPPAFAAIPETQDSQADTNTTNLEVLGTESHPKKLTFLRPETIIGIIVGDLVGIGILALIFLYVYGSKRKKNVENALKQEAATENSDVSSSTTDLRGFTRWACLRKRNENGENSETTSSIDDEVEEPFAQNSHENQRQQEPEQSKEGTLVTVDGDKELELETLLKASAYILGATGSSIMYKAVLEDGTALAVRRIGENNVERFKEFENQVRTIAKLVHPNLVRVRGFYWGLDEKLIIYDFVPNGSLANARHRKMGTSPSGHLPWEVRLKIARGMARGLAYLHEKKHVHGNLKPSNVLLGSAMEPKIRDFGLERLIAGDMIYKSRDSARNFGSKRSTASRDSLHEISLGPSPSPSPSAMSGVSSYHAPESLRSIKPNPKWDVYSFGMIFLELLTGKAVSLDEMGLANGLLVEDKARALRMADVAIRADMEGKEESLLACFKLGYSCVTPLPQKRPSMKEVLHVLDKIPSTSYVYAH* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00324 781 MobiDBLite consensus disorder prediction 437 452 - -
Pte12g00324 781 MobiDBLite consensus disorder prediction 636 667 - -
Pte12g00324 781 Gene3D Ribonuclease Inhibitor 198 292 IPR032675 -
Pte12g00324 781 Pfam Protein kinase domain 477 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00324 781 FunFam Leucine-rich repeat receptor-like protein kinase 199 292 - -
Pte12g00324 781 SUPERFAMILY L domain-like 30 285 - -
Pte12g00324 781 Pfam Leucine Rich repeats (2 copies) 130 168 IPR025875 -
Pte12g00324 781 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 175 774 IPR046959 -
Pte12g00324 781 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pte12g00324 781 MobiDBLite consensus disorder prediction 301 322 - -
Pte12g00324 781 SUPERFAMILY Protein kinase-like (PK-like) 476 772 IPR011009 -
Pte12g00324 781 CDD STKc_IRAK 477 772 - -
Pte12g00324 781 PRINTS Leucine-rich repeat signature 151 164 - -
Pte12g00324 781 PRINTS Leucine-rich repeat signature 106 119 - -
Pte12g00324 781 MobiDBLite consensus disorder prediction 435 456 - -
Pte12g00324 781 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Pte12g00324 781 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 198 - -
Pte12g00324 781 ProSiteProfiles Protein kinase domain profile. 471 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00324 781 Gene3D Phosphorylase Kinase; domain 1 434 546 - -
Pte12g00324 781 Pfam Leucine Rich Repeat 221 240 IPR001611 GO:0005515
Pte12g00324 781 Pfam Leucine Rich Repeat 106 124 IPR001611 GO:0005515
Pte12g00324 781 Gene3D Transferase(Phosphotransferase) domain 1 547 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00324 Pte-Chr12 2666591 2669870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00324 27 782 Receptor kinase-like Gene Family AT4G37250 57.529 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte12g00324 Pkinase 3.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00324 - - qsa:O6P43_024597 1032.71