Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00302 ATGGAGAATTTCACTATGAAAGCTCGTCATTTGAGCTGCTTCTTCTTTGTCACAATATCACTCTCAATATCTTCTGAAGTCAAACTTCTCAGCGCCATTGAATTTCACGTTTCCAATGAACCTCGTACCAGAAGGATTCTACATCAGCCATTGTTCCCGGAAGCTTCTGCTCCACCACCAGGCACAGACTTACAGCCACCGCCACCTCCACCAGAGCAAGAATCACCTCCTTCTCCAGACTCTGACATTCCGTTCTTCCATGAGTACCCAAGTCCCACAGAGCCATCGCCAGATCAGACTCAGCCTCCACCTTCAGCGTCCAATGCGACTGTTCCAATTCCTACAGCCACACAACCCGCCAAGCCAACCAAAAAGGTAGCTATAGCAATTTCCGTTGGAATTGTCACGCTCGGCATGCTCTCTGGTCTTGCTGTCTACTTGTACAAACACAGGGCCAAGCAACCTGGGGAGAAACAGAAACTTGTAGGTGGCAATATTCAGACCCACAGACTTGCTGAGGATTCAAGAGCACCACCTTCCAGTTTTCTCTACATTGGGACTGTAGAACCAAGCATGGTAACGTTGAATGACGGGAGTGAAGTCAATGTAGCAAACAGTTCGCCTTATCACAAGCTCAATTCAATTAAGCGATCCGATCGGTACCGTCCCAGTCCTGAATTACAACCATTGCCGCCATTGACGAAACTTTCAGATGGTAATTCTCCGCCTGCAGTTTCTACTTCGTCTTCGGATGAAGATGAAGGAAGCCATGACACTGCCTTTCATTCACCGCAGGCATCATCATCAGTTAGCTATGAGGAAGGGTATTACACTCCAGCTTCTCGGTACAGTTACCTGGCTAACAATAGCCCAGGTGCCTCTGCCAGAAGTACGACTTCTGTACCTCATTCCAAGAGGACTTCACCGAAATCTCGATTATCAGCTTCATCCCCAGACGTTAGGCATGTTATTATACCATCGATAAAGCAGGGACAACCTCCCCCTCCTCCACCCCCACCACTACTTCCGGCAGTGCCGCCTCTAGGTTCAGATTCAACAGCACAATACTCTAGTTTTCATGATAAGAAAGTGACTGCATGTCCACCTAAAAAGCCAAGATTTCCACCCCCTGCACCACAGATGCTTCAGTCAAATAGTACTCTATCAAGACAGGCAGCAAAAATTGAAGGCATCCCTCCTCCTCCGCCTCCACCTCCTCCCCCGCTACCATTACAATCCACACCACGTAAAGTAGGTATTACAATGAACAATGTTTCTACAACTTCGGTATCTGTGCAGCCACGATCTTTGTTTCCAGTTCCGAAACCTGCTGCTGTTAATGACATAACGCAAACTTCTGAACATGTCCACACCGAGTTCAGGTCTGCAGAAAAGCTTGATATTGATGACACTGAGGGAGCAAAGCCAAAATTGAAGCCCCTGCATTGGGACAAAGTTCGTGCAACTTCAGACCGTGCCACAGTTTGGGATAAACTCAAATCAAGTTCTTTTCAATTGAACGAGGATATGATGGAGACTCTCTTTGGATGCAATTCTTCAAACAGCATCCCTAAAGAATCTGCCAGAAAATCAGTTCTTCCCCCTGTGGAACAGGAGAACAGAGTCTTGGACCCAAAGAAGTCACAGAACATTGCCATACTTCTAAGGGCCCTAAATGTAACCAGAGATGAGGTCTCTGAAGCTCTTTTAGATGGAAATCCTGAGGGTTTAGGTCCTGAGCTTTTGGAAACTCTTGTGAAGATGGCTCCTACTAAGGAGGAAGAGATAAAGCTTAGAGAATATCACGGAGACATCTCCAAACTCGGGTCCGCAGAAAGATTCCTTAAAGCCATTCTCGATGTTCCTTTTGCATTCAAGAGAGTTGAAGCAATGCTATATCGTGCAAACTTTGATACAGAAGTTAACTACTTGAGGAAGTCCTTTCAAACCCTAGAGGCAGCAAGCGAAGAATTGAAGAATAGCCGATTATTCCTCAAACTCCTTGAAGCTGTTCTCCGGACAGGGAACAGAATGAATGTTGGAACTAACCGAGGTGATGCTAGGGCATTTAAACTTGAGACACTCTTAAAGCTTGTAGATATAAAAGGAACAGATGGAAAGACAACATTGCTCCACTTTGTGGTCCAGGAGATCATCAGGTCTGAAGGTGCAGATTGTGATTCTACAAATGGAAATGATCAGAAGCAAATGCAGTCTAAAATCAAGGAAGATGAATTCAGAAAGCAAGGATTGCAGGTTGTGGCTGGACTAGGAAGAGAACTAGGGGATGTTAAAAAAGCAGCAGGAATGGATTCAGATGTATTAAGCAGCTATGTCACTAAGCTTGAGTTGGGGCTTGACAAAGTAAGATTAGTCCTGCAATATGAGAAGCCAGATATGCAAGGAAATTTCTTCAATTCGACAAAGCAATTTCTGAAACGAGCTGAAGAAGAAATTCAAAGGATAAAGGAACATGAAAGAAAGGCCTTATGGCTTGTGAAAGAAGTCACAGAATACTTTCATGGGAATGTAGCAAAAGAAGAAGCCCATCCTTTCAGAATTTTCATGATTGTAAGGGACTTCCTAGCTACTTTGGATCAAGTATGCAAGGAAGTAGGAAGCATGCAGGATAGAACCGTCGTTGGTTCTGCTAGATCCTTCCGCATAGCTGCAAGTGCGTCATTACCAGTTCTGAACAGGTATAATGTCCGACAAGATGCAAGTTCGGATGAGGAAAGCTTGTCTCCTTAG 2751 0.45 MENFTMKARHLSCFFFVTISLSISSEVKLLSAIEFHVSNEPRTRRILHQPLFPEASAPPPGTDLQPPPPPPEQESPPSPDSDIPFFHEYPSPTEPSPDQTQPPPSASNATVPIPTATQPAKPTKKVAIAISVGIVTLGMLSGLAVYLYKHRAKQPGEKQKLVGGNIQTHRLAEDSRAPPSSFLYIGTVEPSMVTLNDGSEVNVANSSPYHKLNSIKRSDRYRPSPELQPLPPLTKLSDGNSPPAVSTSSSDEDEGSHDTAFHSPQASSSVSYEEGYYTPASRYSYLANNSPGASARSTTSVPHSKRTSPKSRLSASSPDVRHVIIPSIKQGQPPPPPPPPLLPAVPPLGSDSTAQYSSFHDKKVTACPPKKPRFPPPAPQMLQSNSTLSRQAAKIEGIPPPPPPPPPPLPLQSTPRKVGITMNNVSTTSVSVQPRSLFPVPKPAAVNDITQTSEHVHTEFRSAEKLDIDDTEGAKPKLKPLHWDKVRATSDRATVWDKLKSSSFQLNEDMMETLFGCNSSNSIPKESARKSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGPELLETLVKMAPTKEEEIKLREYHGDISKLGSAERFLKAILDVPFAFKRVEAMLYRANFDTEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDARAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGADCDSTNGNDQKQMQSKIKEDEFRKQGLQVVAGLGRELGDVKKAAGMDSDVLSSYVTKLELGLDKVRLVLQYEKPDMQGNFFNSTKQFLKRAEEEIQRIKEHERKALWLVKEVTEYFHGNVAKEEAHPFRIFMIVRDFLATLDQVCKEVGSMQDRTVVGSARSFRIAASASLPVLNRYNVRQDASSDEESLSP* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00302 916 MobiDBLite consensus disorder prediction 52 122 - -
Pte12g00302 916 ProSiteProfiles Formin homology-2 (FH2) domain profile. 468 891 IPR015425 -
Pte12g00302 916 MobiDBLite consensus disorder prediction 396 413 - -
Pte12g00302 916 Pfam Formin Homology 2 Domain 473 865 IPR015425 -
Pte12g00302 916 Coils Coil 808 828 - -
Pte12g00302 916 PANTHER FORMIN-RELATED 16 910 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte12g00302 916 MobiDBLite consensus disorder prediction 289 315 - -
Pte12g00302 916 MobiDBLite consensus disorder prediction 214 273 - -
Pte12g00302 916 SUPERFAMILY Formin homology 2 domain (FH2 domain) 399 876 - -
Pte12g00302 916 Gene3D Formin, FH2 domain 462 876 IPR042201 -
Pte12g00302 916 MobiDBLite consensus disorder prediction 103 117 - -
Pte12g00302 916 MobiDBLite consensus disorder prediction 53 78 - -
Pte12g00302 916 SMART it6_source 468 880 IPR015425 -
Pte12g00302 916 MobiDBLite consensus disorder prediction 388 413 - -
Pte12g00302 916 MobiDBLite consensus disorder prediction 289 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00302 Pte-Chr12 2442454 2446982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00302 426 906 FH2 protein (formin) Gene Family AT5G67470 72.314 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00302 - - qsa:O6P43_024557 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00302 12 2442454 2446982 Pte12g00302 12 2442454 2446982 RCT