Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00300 ATGGGGTTTGGATCCCAAGATACTTGTTCATTACATGGTTTAGAGTATGATGATGATGATGATGTTGTCTCAAGCAACGGAAGAGGCTGGTTGAAGTGTGCTAGATTGGACGCAATTCAATGGATTCTCAATACCCGGGAATCATTTGGATTCCGTTTTCATACTGCGTATTTATCAATGACCTATTTTGATCGGTTTCTTTCAAGGCGATTCATCAAAGATGGAAAATTGTGGGCTATTAGGTTGTTATCTGTGGCATGCTTATCTCTAGCAGCAAAAATGGAGGAATGCAACGTGCCAAATTTATCCGATTATCCACTTGAAGATTATTGCTTTGAAAACAAAGTGATTCAGAGAATGGAGTTAGTGGTTTTGAGTACTCTGGAGTGGAAGATGGGATCACTGACCCCATTTGCATACTTAAATTACTTCATCAAAAGATTCTATAAGCAATCTAGACCTCAAGTGATACTCGACAGAGCCACTGAACTTATCATATCAGCCATAAAAGAGATTAATTTGATAAATCATCGGCCATCTGTGATTGCTTCTGCTGCTGTATTGGCTGCAATTGAAGTTCAATTAACAAAGAAGACACTGGAGCTTAAGTTGGGATCAATCTCAACATGGGGATCTATTGAAGTTGAACACGTACTTTCCTGCTATACTATAATGCAGGAAATTGAGAGGCGATCAATCAGGACGCCACCATTGGTGACATCTTCACATTTTTTGAGAAATCCTTCGAGTTCCATTGGTGCTTTGGAGAACATGAGTTTCACTTCTCTAGCTGCTGGCACCGGTACTAAGAGAAGGCTTAATTTTCGAGATATCGATGAAAATTGTCCAGTGCTGAAATTACATCGTACTTAA 873 0.394 MGFGSQDTCSLHGLEYDDDDDVVSSNGRGWLKCARLDAIQWILNTRESFGFRFHTAYLSMTYFDRFLSRRFIKDGKLWAIRLLSVACLSLAAKMEECNVPNLSDYPLEDYCFENKVIQRMELVVLSTLEWKMGSLTPFAYLNYFIKRFYKQSRPQVILDRATELIISAIKEINLINHRPSVIASAAVLAAIEVQLTKKTLELKLGSISTWGSIEVEHVLSCYTIMQEIERRSIRTPPLVTSSHFLRNPSSSIGALENMSFTSLAAGTGTKRRLNFRDIDENCPVLKLHRT* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00300 290 SUPERFAMILY Cyclin-like 28 132 IPR036915 -
Pte12g00300 290 CDD CYCLIN_AtCycD-like_rpt1 34 130 - -
Pte12g00300 290 SMART Cyclin_C_2 135 258 IPR004367 -
Pte12g00300 290 Pfam Cyclin, C-terminal domain 136 229 IPR004367 -
Pte12g00300 290 SUPERFAMILY Cyclin-like 118 191 IPR036915 -
Pte12g00300 290 ProSitePatterns Cyclins signature. 35 66 IPR006671 -
Pte12g00300 290 PANTHER CYCLINS 36 229 IPR039361 -
Pte12g00300 290 SMART cyclin_7 143 227 IPR013763 -
Pte12g00300 290 SMART cyclin_7 40 126 IPR013763 -
Pte12g00300 290 Gene3D - 34 133 - -
Pte12g00300 290 Gene3D - 134 222 - -
Pte12g00300 290 FunFam Cyclin-D5-1 30 133 - -
Pte12g00300 290 CDD CYCLIN_AtCycD-like_rpt2 136 225 - -
Pte12g00300 290 Pfam Cyclin, N-terminal domain 34 132 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00300 Pte-Chr12 2430061 2431531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00300 35 214 Core Cell Cycle Gene Families AT4G37630 44.503 4.65e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00300 K18811 - rcu:8283359 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00300 12 2430061 2431531 Pte12g00300 12 2430061 2431531 RCT