Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00284 ATGATTCTCTCAGCCTTCCCTCCTTCCTTCCCATCGGATTCCCCTTTTGCTAATCCATTCACTTCAGCCTTCAATGGAGGCTTCACGCCGTGGGACTGCTCGGAGCTCATGTCCGTCTTGAGCAAACCGAGTACAAACCCACCTGTGATCACATCATCATCAGGTTCAGATGGATCCTCCGAGACAAACCAAGAAGGCCATGTCAAAATTCAGTCAGATTCCAACCAAACGAACCGGACGGTTGGCACAATGGACGACCGAAAGCGCAGGAGAATGATATCGAACCGGGAATCAGCGAAGAGGTCACGCATGCGTAAACAGAAGCATTTAGATAACTTAAGGAACCAGGTGACCCGGTTTAGGATGCAAAACCGAGAATTATCAAACCGGTTGCGGTTTTTTCAGTACCATGGTCACCGTGTACGAATGGAAAATGATCAACTCCGGTCTGAGCTCACTATGCTCCGCCAAACATTGTCTGACTTAAGTCAAATTTTGGTTTTTCAGCAACTCGAGCCTTTCTCAGCTGGTTGGCCATGCAATACAACAATCTCACCCCAATAA 564 0.4787 MILSAFPPSFPSDSPFANPFTSAFNGGFTPWDCSELMSVLSKPSTNPPVITSSSGSDGSSETNQEGHVKIQSDSNQTNRTVGTMDDRKRRRMISNRESAKRSRMRKQKHLDNLRNQVTRFRMQNRELSNRLRFFQYHGHRVRMENDQLRSELTMLRQTLSDLSQILVFQQLEPFSAGWPCNTTISPQ* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00284 187 MobiDBLite consensus disorder prediction 42 81 - -
Pte12g00284 187 MobiDBLite consensus disorder prediction 42 108 - -
Pte12g00284 187 Coils Coil 96 130 - -
Pte12g00284 187 Coils Coil 145 165 - -
Pte12g00284 187 Gene3D - 86 137 - -
Pte12g00284 187 Pfam bZIP transcription factor 86 131 IPR004827 GO:0003700|GO:0006355
Pte12g00284 187 SUPERFAMILY Leucine zipper domain 87 135 IPR046347 GO:0003700|GO:0006355
Pte12g00284 187 FunFam BZIP transcription factor 85 136 - -
Pte12g00284 187 PANTHER BZIP TRANSCRIPTION FACTOR 44 47 169 - -
Pte12g00284 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Pte12g00284 187 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Pte12g00284 187 MobiDBLite consensus disorder prediction 82 100 - -
Pte12g00284 187 CDD bZIP_plant_GBF1 88 132 IPR045314 GO:0003700|GO:0006355
Pte12g00284 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00284 Pte-Chr12 2335131 2335694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00284 2 170 bZIP Transcription Factor Family AT3G49760 40.237 4.00e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte12g00284 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00284 - - qsa:O6P43_024519 211.846