Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00281 ATGTCTTCTTCCCCTGCCGCTATTCGCTTTTACTTGGCTGAAATTGTCTGCGCTCTCGAGCACCTTCACGACATGGGCATTGCTTACTGTGATTTGAAGTCTGAGAATGTTCTAATTCAGCAATCAGTTCATGTGACTCTCACAGACTTTGACCTCTCAAGGAAACTCATGCCCAAGTCCATCCAAACTACCCTTTACGAAGAGAAGCTCGCTGATACACGACGTAAACATCGCAGGAAGTTCGCATGGTGGATGCCCGTCACTAGAAATATAAAAAGTGACTTGATGAAAGCCAAGTCAGCCCGCGTCAGCCCGCGTCAGCTCGATGAATAG 333 0.4745 MSSSPAAIRFYLAEIVCALEHLHDMGIAYCDLKSENVLIQQSVHVTLTDFDLSRKLMPKSIQTTLYEEKLADTRRKHRRKFAWWMPVTRNIKSDLMKAKSARVSPRQLDE* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00281 110 FunFam Serine/threonine-protein kinase OXI1 2 58 - -
Pte12g00281 110 Pfam Protein kinase domain 4 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00281 110 SUPERFAMILY Protein kinase-like (PK-like) 5 62 IPR011009 -
Pte12g00281 110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 27 39 IPR008271 GO:0004672|GO:0006468
Pte12g00281 110 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00281 110 Gene3D Transferase(Phosphotransferase) domain 1 6 65 - -
Pte12g00281 110 PANTHER FLIPPASE KINASE 1-RELATED 5 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00281 Pte-Chr12 2310565 2310897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00281 4 105 AGC Kinase Gene Family AT3G20830 56.604 2.58e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte12g00281 Pkinase 1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00281 - K08286 qsa:O6P43_000123 127.102