Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00261 ATGGCTGGATTGGATTTAGGCACTGCTTCTCGCTTTTCTCACAATCTTCATAGAGCGGACTTACACCTTCAACCACATCTACCGCATCAGCAGCAGCAACTGCAAGACCAGCAACCTAACTCAGAAGATGAACAACACAATCAAGGTCTCGAGCTTGTTTCCGGCACATCAGGTGGCCATGGTGACGTCGTCGCTCGCCGACCTCGAGGGAGACCGGCTGGCTCGAAGAACAAGCCGAAGCCACCGGTCATAATAACGAGAGAGAGCGCAAACACGCTCAGAGCTCATATACTTGAAGTGGGGAATGGCTGCGACGTGTTTGACAGTGTGGCTACCTATGCCAGGCGTCGTCAGCGTGGGATCTGTGTCCTCAGCGGGAGTGGTACAGTCACGAATGTCAGCTTAAGGCAGCCGGCGGCTGCGGGAGCCATAGTGACTCTACATGGAAGATTCGAAATACTTTCTTTGTCGGGATCCTTCTTGCCACCACCAGCGCCGCCTGGTGCGACCAGTCTGACGATATTCTTAGCGGGTGGGCAAGGACAAGTTGTTGGAGGGAGTGTGGTGGGTGAGTTAACTGCAGCCGGACCGGTTATTGTCATAGCATCGTCTTTCACCAACGTTGCATATGAGAGATTGCCTCTGGATGAGCAGGAGGAGCAGCTTCAGATGCAACAACCTTCAGCGTCACAGGGTTCTGGTGGTGGTGTAGGAAACAACCAGTTCTCAGACCCATCGGCGGGGCTCCCATTCCTCAATCTGCCACTGAATATGCAGAATGTTCAGCTGCCAGTCGACGGGTGGGCTGGAAATTCAAACGGGCGTCCCTCATTCTAG 837 0.5388 MAGLDLGTASRFSHNLHRADLHLQPHLPHQQQQLQDQQPNSEDEQHNQGLELVSGTSGGHGDVVARRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSVATYARRRQRGICVLSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIASSFTNVAYERLPLDEQEEQLQMQQPSASQGSGGGVGNNQFSDPSAGLPFLNLPLNMQNVQLPVDGWAGNSNGRPSF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00261 278 MobiDBLite consensus disorder prediction 219 242 - -
Pte12g00261 278 FunFam AT-hook motif nuclear-localized protein 93 221 - -
Pte12g00261 278 MobiDBLite consensus disorder prediction 28 84 - -
Pte12g00261 278 PIRSF ESCAROLA 10 277 IPR014476 GO:0003680
Pte12g00261 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Pte12g00261 278 Gene3D - 93 229 - -
Pte12g00261 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 222 - -
Pte12g00261 278 MobiDBLite consensus disorder prediction 28 54 - -
Pte12g00261 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 233 IPR014476 GO:0003680
Pte12g00261 278 CDD DUF296 94 177 IPR005175 -
Pte12g00261 278 ProSiteProfiles PPC domain profile profile. 90 227 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00261 Pte-Chr12 2094824 2096696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00261 1 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.097 8.11e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00261 - - qsa:O6P43_024484 395.586