Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00249 ATGGGGAGTGGAGTCTCGAGCCTCAGCTCCTGTTTCAAACCGGTCAACAGGAAGACGAACCAACCGGACGTCGTCTTCACAGCTACTGAACCGTTGGATGAAACCCTAGGCCACTCTTTCTGTTACGTGAGATCTTCTGCTCGCTTCGCTTCCCCTGGTCACTCCGATCGTTATCTCTCTCCTACCAGCTCTCTACGCTTCTCTCCTACTCACGAACCCACCTCCCGTACCCGACCCGATTTACCGTATGAGACTGGGTTCAAGGCCATTTCTGGAGCTTCGGTTAGTGCGAACAGCTCAGTTCCCAGAACGGTACTCCAGCTCGATAATATTCAGGATGATGGCACCAGTGATGCTACCCTTGGAGGTGGCGCGGCTGCTGTTAGAGCTAGTATACTGAATGGCTTTGAGAGCACTTCGTCGTTTAGTGCTCTTCCGCTTCAACCAGTGCCAAGAGGCGGTGACCCGTCCGGTCCTTTAGAACGGAGTGGTTTCTTTCTTTCCGGTCCGATCGAGCGTGGTGCTCTCTCTGGTCCTATCGAAGCCAACGCTGCTGCCGAAGGGGGAGGGAGAGTTCCCTTCTCTGCGCCGCTGGGTGACGTTTATGTGAAGAAGAAGCGTAGGAAGGGTATGAGGAGGATTCGGAAGGCGTTTCCGACGAACATTTCGGAAAAGAAGCGGCCTTGGGTGGTGCCGGTGCTGAATTTCGTTGGCCGGAAGGACGCTTCGGCGCAGGTAGAGGAGTTGGAGGTGAAAAGTGAGAGCAACGTTCAGTGGGCGCTTGGCAAGGCAGGTGAGGATCGGGTACATGTGGTAGTATCGGAAGAACAAGGTTGGCTTTTTGTTGGGATTTATGATGGGTTTAACGGTCCGGATGCACCCGAGTTTCTCATGAGCAATCTTTATCGTGCTGTTTATACTGAGCTTCAGGGCTTGTTCTGGGAAGTTGAAGACGCGGAGCTAGCCAACTCGGCGATTGCGGCTGTGGAACTCGATGCTGTTGAAGTGGAAATTAAGCCTTCATCAGAAATCACCTGTGGCCATGTTAGCGACAATGGGAAATTTCCGGAAGGTGGAGACAATTCGGACCCATTTTCGGTCAACACAATTCCAACGAAGAAAGTGACATTTCAATCGGAGGGGACGGAAATTAGGCAGCGACGGAGGCTATGGGAATTTCTTGCCGAGAATGACGCTGAAGATGGGCTTGATCTTTCAGGGTCTGACAGGTTTGCTTTCTCAGTGGACGATGCAATTACCGTTAGCAATGCTGGCTCCGCCGTGAGTAGACGGTGGTTGTTGTTATCGAAATTGAAACACGGGTTATCCAGACATAAGGAAGGTCATGCGAAAAGCTTGTTTCCGTGGAAGTATAGCATAGAGGACAAAGAGAAGGCAGAGGTCGAGAATCGAGTGGAAGAGAATAAAACTAATCCTTGTGGCAAGAAACGGAAAGTGGGTCCTGTTGATCATGAGTTGGTTTTGAGAGCATTAGCTAGGGCTCTTGAAGTTGCAGAGCTTGCCTATTTGGATATGACGGAGAAGGTTCTTAGCACTAACGCGGAGCTAGCATTGATGGGTTCATGTGTGCTGGCTGTTTTAATGAGAGACGAGGATGTATATGTAATGAATGTTGGGGATTGTAGAGCTATTGTTGCAAGGTATGAGCCTAAAGAAGTGGGTTCTAGAACTGAGATTGCCGACGAAGGTGATGGGTCAGGCATCGAGGGTATATTGGAGGATACCCTTGGGGAGACATCAGCAGCTTTGGGTGAAAGGACAAACAAACTGGGGAGGGAGGGTCCTGCACAAGAAATGCGATTGACGGCATTGCAACTCTCCACTGACCACAGTACGAGCATTGAAGAAGAAGTCTTACGGATCAAGACTGAACACCCGGATGATAACAACTGTATAGTCAATGATAGAGTGAAAGGTCGCCTTAAGGTCACAAGAGCTTTCGGAGCAGGGTTTTTGAAAAAGCCAAAGTTGAATGATGCAGTGCTGGAAATGTTTCGCAATGAGTACATTGGCAATGATCCATACATATCCTGCTTGCCTTCGCTGTGCCACCATCAACTATGCCAAAGAGATCAATTCTTAATACTGTCGTCAGATGGTTTGTATCAGTATCTAAGTAACCAGGAAGTTGTTACTCTTGTCGAGAATTTCATGGAGAAGTATCCAGATGGGGACCCTGCACAACATTTGATAGAAGAGCTACTTCTCCGTGCTGCCAAAAAAGCTGGATTGGATGTCCATGCGTTGCTGGACATTCCCCAAGGAGATCGTAGAAAGTACCATGATGATGTGACAGTGATGGTCATATCGCTAGAAGGAAGAATCTGGAAATCAACAGGGAAGTACCCTTGA 2373 0.4914 MGSGVSSLSSCFKPVNRKTNQPDVVFTATEPLDETLGHSFCYVRSSARFASPGHSDRYLSPTSSLRFSPTHEPTSRTRPDLPYETGFKAISGASVSANSSVPRTVLQLDNIQDDGTSDATLGGGAAAVRASILNGFESTSSFSALPLQPVPRGGDPSGPLERSGFFLSGPIERGALSGPIEANAAAEGGGRVPFSAPLGDVYVKKKRRKGMRRIRKAFPTNISEKKRPWVVPVLNFVGRKDASAQVEELEVKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMSNLYRAVYTELQGLFWEVEDAELANSAIAAVELDAVEVEIKPSSEITCGHVSDNGKFPEGGDNSDPFSVNTIPTKKVTFQSEGTEIRQRRRLWEFLAENDAEDGLDLSGSDRFAFSVDDAITVSNAGSAVSRRWLLLSKLKHGLSRHKEGHAKSLFPWKYSIEDKEKAEVENRVEENKTNPCGKKRKVGPVDHELVLRALARALEVAELAYLDMTEKVLSTNAELALMGSCVLAVLMRDEDVYVMNVGDCRAIVARYEPKEVGSRTEIADEGDGSGIEGILEDTLGETSAALGERTNKLGREGPAQEMRLTALQLSTDHSTSIEEEVLRIKTEHPDDNNCIVNDRVKGRLKVTRAFGAGFLKKPKLNDAVLEMFRNEYIGNDPYISCLPSLCHHQLCQRDQFLILSSDGLYQYLSNQEVVTLVENFMEKYPDGDPAQHLIEELLLRAAKKAGLDVHALLDIPQGDRRKYHDDVTVMVISLEGRIWKSTGKYP* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00249 790 Gene3D - 235 354 IPR036457 -
Pte12g00249 790 MobiDBLite consensus disorder prediction 51 82 - -
Pte12g00249 790 PANTHER PROTEIN PHOSPHATASE 2C 251 777 IPR015655 GO:0004722|GO:0006470
Pte12g00249 790 SUPERFAMILY PP2C-like 262 779 IPR036457 -
Pte12g00249 790 Pfam Protein phosphatase 2C 611 745 IPR001932 -
Pte12g00249 790 ProSiteProfiles PPM-type phosphatase domain profile. 250 778 IPR001932 -
Pte12g00249 790 Gene3D - 394 786 IPR036457 -
Pte12g00249 790 SMART PP2C_4 250 776 IPR001932 -
Pte12g00249 790 CDD PP2Cc 490 778 IPR001932 -
Pte12g00249 790 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00249 Pte-Chr12 2001751 2007489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00249 1 789 PP2C-type Phosphatase Gene Family AT2G35350 55.342 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00249 - - qsa:O6P43_033985 1117.83