Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte12g00246 | ATGGGTTGTATACACTCCAGAACAGCACATCTCCACTCTCCTGATGAGCCTTCCTTGCCCGAAGACCCCAACAAAAACGTCCCAGGTAATGGCGATGAAGTTGACCAGGATTCTCAAGTACCCGCATTCAAGGAGTACACTTTGAGTGAACTTCGCAAGGCTACCAATGGATTCAGTGCACATTACATAGTCTCAGAGAGTGGTGAGAAAGCTCCTAATGTTGTTTATAGAGGGAAACTTGAGAATAATCGATTTGTCGCTGTGAAAAGGTTTTCTAAGCAGTCTTGGCCGGATGCTCAACAGTTTGTGGCAGAGGCGTCTGGTGTAGGGAAAGTGAGGCACAGAAGATTGATCAATCTAATTGGTTGTTGTGCTGAAGGTGATGAGCGGCTTTTGGTAGCTGAGTTTATGCCCAATGACACTCTATCCAAGCATCTATTTCATTGGGAGAAGCAACCACTACCATGGGAAATGCGTGTTAGAGTTGCATATTATGTAGCACAGGCACTTGATCACTGTAACATGCAAAACAGGAAAATATATCATGACCTGAACGCGTACAGAGTTCTTTTTGACGAGGATGGAGATCCTCGCTTATCCAGTTTTGGACTTATGAAAAACAGTCGAGATGGGAAAAGCTATAGCACTAATTTAGCTTATACTCCACCTGAGTTTTTGAGAACAGGCAGAGTTATACCAGAGAGCGTAATTTACAGTTATGGAACAGTTTTGTTGGACCTTTTGAGTGGCAAGCACATTCCTCCCAGTCATGCTCTGGACCTAATTAGGGGTAAAAATGTACTTTTGTTGATGGATTCATCCCTTGAAGGACAGTATGCTGCTGATGATGCTACAAAACTGGTTGAACTTGCTTCCCTATGTCTTCAGTTTGAAGCTAGGGAGCGCCCTGATATCAAGTTTCTTCTTACAGCCGTAGCACCACTGCAAAAGCAGAAAGAGGTAGCATCTCATGTTCTCATGGGTCTAACCAAAAGTACCGTAGTGCTGCCAACCATGCTCTCACCTCTTGGGAAGGCATGCGCGCGGATGGATCTTGCCTCTGTTCATGATATTCTGCTCAAAACTGGTTATAAAGATGAAGAAGGGCAAGAAAATGAGCTTTCTTTCCAAGAATGGACACAACAAGTGCAAGATATGTTGAACACAAAGAAATTTGGAGACATTGCATTCCGGGACAAAGATTTCAAAAACGCAATTGAACATTATTCAAAGCTAGTAGTGATGATGTCTGTTCCGTCAGCGACTGTATTTGCTAGAAGGGCATTCTCTTACTTGATGAACGAGCAGGCAGAGCTTGCTTTAAGGGATGCAATGCAGGCTCAGGTTTGCATACCAGAGTGGCCAACTGCATTTTACTTGCAGGCCCTTGCACTTTGGAAACTTGGCATGGAATCTGATGCACAGGATATGCTCAATGATGGTGCAGCTTTTGAAGCAAAGAGAAGCAATAGCTGGCGTGGTTAA | 1485 | 0.4397 | MGCIHSRTAHLHSPDEPSLPEDPNKNVPGNGDEVDQDSQVPAFKEYTLSELRKATNGFSAHYIVSESGEKAPNVVYRGKLENNRFVAVKRFSKQSWPDAQQFVAEASGVGKVRHRRLINLIGCCAEGDERLLVAEFMPNDTLSKHLFHWEKQPLPWEMRVRVAYYVAQALDHCNMQNRKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYAADDATKLVELASLCLQFEARERPDIKFLLTAVAPLQKQKEVASHVLMGLTKSTVVLPTMLSPLGKACARMDLASVHDILLKTGYKDEEGQENELSFQEWTQQVQDMLNTKKFGDIAFRDKDFKNAIEHYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPEWPTAFYLQALALWKLGMESDAQDMLNDGAAFEAKRSNSWRG* | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte12g00246 | 494 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 30 | 489 | IPR045845 | GO:0004672|GO:0009742 | |
Pte12g00246 | 494 | FunFam | probable serine/threonine-protein kinase At5g41260 | 138 | 329 | - | - | |
Pte12g00246 | 494 | Gene3D | Tetratricopeptide repeat domain | 384 | 493 | IPR011990 | GO:0005515 | |
Pte12g00246 | 494 | FunFam | probable serine/threonine-protein kinase At4g35230 | 384 | 493 | - | - | |
Pte12g00246 | 494 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Pte12g00246 | 494 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 312 | IPR011009 | - | |
Pte12g00246 | 494 | FunFam | probable serine/threonine-protein kinase At4g35230 | 33 | 136 | - | - | |
Pte12g00246 | 494 | Gene3D | Transferase(Phosphotransferase) domain 1 | 138 | 330 | - | - | |
Pte12g00246 | 494 | SUPERFAMILY | TPR-like | 387 | 483 | IPR011990 | GO:0005515 | |
Pte12g00246 | 494 | ProSiteProfiles | Protein kinase domain profile. | 61 | 327 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte12g00246 | 494 | Pfam | Protein tyrosine and serine/threonine kinase | 74 | 309 | IPR001245 | GO:0004672|GO:0006468 | |
Pte12g00246 | 494 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 136 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte12g00246 | Pte-Chr12 | 1985271 | 1990328 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte12g00246 | 2 | 315 | Glycoside Hydrolase | AT3G07070 | 31.454 | 2.08e-41 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Pte12g00246 | PK_Tyr_Ser-Thr | 4.3e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte12g00246 | K14500 | - | gmx:100793576 | 897.501 |