Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00214 ATGGGAAAGCAAGGTCCTTGCTATCACTGTGGAGTTACTAGTACACCCTTATGGCGCAACGGACCAGCAGACAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACAAAAGGAACACTTACAAACTATACCCCTTTACATGCTCGGGCAGAATCAGATGATTATGAAGATCAACGGGTTTCCAGGGTTAAAAGTATATCTATCAATAAGCACCAAGAAGTGAAATTACTCAAACGAAAGCAGACTCATGACAATGTAGTGTTTGGGGCACCTGATTATAACCATGTATTCCGGAGGGTTGTTGATGAAGACACCAGTAATAGATCAAGTTCAGGATCCGCCATATCAAACTCTGATAGTTATGCTCAAATTGGCAGCACAGATGCTAGTGATTTCACAGGTCCTGCTCAATCGGTTGTGTGGGATGCAATGGTGCCTTCAAAGAAGAGGACATGTGTGGGCCGTCCAAAACAATCGGCTGTTGAGAAGCTCACAAAAGATTTGTGTACAATTTTACATGAACAGCAGTCTTATTTCTCCGCATCTTCTGAAGATGATCTACTATTTGAAAGTGAAACACCGATGGTCTCTGTTGAGATAGGACATGGAACTGTTCTCATTCGACACCCAAGTTCAGTAGCTCGAGAAGAGGAATCTGAAGCAAGCTCTCTTTCAGTTGATAAGCATTGCCAAATGAGTGAGGCTTATTCTTATGTTGGTTCCATTGCTGAACATATTGAAACCAAGGGTGTAAACTTTCCAACTTATGAATTTGAAAAGATCAAGAATGCTACTGAGGGGGGGATGCAGCTGGAGCAACACAAAAGGGACAAGTCTCATCTGGAAAAATTACAAATCCTGGGAAACCATAATTCTCCGTTGCAATCTGTAGAATTAAATGACATTGTAAATTATGAGGGGTTTATGAAGCACTTGACAAGAGAAGAGCAGCAACAACTCCTCAAGTATCTTCCTCTGGTGGATACTATGAAACTGCCTGAGAGCCTTAAAAACATGTTTGACAGCTCTCAATTCAAGGAGAACTTAATCAACTTCCAGCACCTTCTTGCTGAAGGCGTTTGGGATGTCTCCCTTGTTGGGGCGAAACCTGAGGACTGCAGAATTCTCAAAAGGCTTGCATTAACCAATTTGTCGAAATCAAAATGGGTTGGACACTATAATTCACTCAAGAGTTGTAGAAATAGTATAGTCAAGTCTGTTGTTCAAGAGTCCCCTGCTACTGCATCAAGCAATGTCATCAATGTCAAAAGATTTCGTGATGGCCAAAACCCGAGTATAGCAGAAGGGAGGACATCCGTGAAGAGCCCCAAAAGGGCAATGATGAAGTCTAGTGCTGAGGGAAAGGAAGTGCTTGAAGATGGTTCCCTATTCAGTCCAAGAAACTTATTTGCTTTGCCAGCTGATGGGAGCGCCCTCATTCTGGATTCTTTCAGTATTGTTGAGGAAAGTTCTGATCAAGATCTGCTTCTGGAAGTGCCATCCAATGGTTCTTTCCCCGAGGCAGAACTCTTGCACCCATCTTTAAGCCTTGGTGCACAGGCCAGTACTAGTTGCAGCTCGATACATCCACATCTCCTCCGTCCTTGA 1614 0.4331 MGKQGPCYHCGVTSTPLWRNGPADKPVLCNACGSRWRTKGTLTNYTPLHARAESDDYEDQRVSRVKSISINKHQEVKLLKRKQTHDNVVFGAPDYNHVFRRVVDEDTSNRSSSGSAISNSDSYAQIGSTDASDFTGPAQSVVWDAMVPSKKRTCVGRPKQSAVEKLTKDLCTILHEQQSYFSASSEDDLLFESETPMVSVEIGHGTVLIRHPSSVAREEESEASSLSVDKHCQMSEAYSYVGSIAEHIETKGVNFPTYEFEKIKNATEGGMQLEQHKRDKSHLEKLQILGNHNSPLQSVELNDIVNYEGFMKHLTREEQQQLLKYLPLVDTMKLPESLKNMFDSSQFKENLINFQHLLAEGVWDVSLVGAKPEDCRILKRLALTNLSKSKWVGHYNSLKSCRNSIVKSVVQESPATASSNVINVKRFRDGQNPSIAEGRTSVKSPKRAMMKSSAEGKEVLEDGSLFSPRNLFALPADGSALILDSFSIVEESSDQDLLLEVPSNGSFPEAELLHPSLSLGAQASTSCSSIHPHLLRP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00214 537 PANTHER OSJNBB0038F03.10 PROTEIN 1 529 IPR044589 -
Pte12g00214 537 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Pte12g00214 537 Gene3D - 3 85 IPR013088 GO:0006355|GO:0008270
Pte12g00214 537 Pfam Asx homology domain 276 364 IPR028020 -
Pte12g00214 537 Gene3D - 283 380 IPR038108 -
Pte12g00214 537 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Pte12g00214 537 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Pte12g00214 537 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 292 404 IPR044867 -
Pte12g00214 537 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Pte12g00214 537 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00214 Pte-Chr12 1724519 1728655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00214 1 514 C2C2-Gata Transcription Factor Family AT4G17570 50.951 3.10e-151 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte12g00214 ASXH 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00214 - - gmx:100803914 737.643