Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00198 ATGCACATTGAAGAGTTGAAGGCGGAAGAGGTAGGTGAAGAGGAACCGGAATCTTCACCGGATGAGGATGCTTCCGGCGGAGGAAGCATCGTTCCGACTGACGTGAAAAGGCTTCTAGTTGGTCTTGGGGCTCGTGCTCTTTTCTATCCGACCCTTTTGTATAATGTCGTTAGAAATAAGATTGAGCCGGAGTTTCATTGGTGGGACAAAGTGGACGAGTTTATATTACTAGGCGCGGTTCCCTTCCCTGTCGACGTGCCCTTTCTAAAGGAGCTTGGTGTTCATGGAGTGATCACACTAAATGAGTCATATGAAACTTTGGTTCCACCCAGTCTGTATCAAGCTTATGGAATAGACCATCTTGTGATTCCAACGAGAGATTATTGTTTTGCACCAGCTTTGGCTGATATATGTCATGCTGTAGAGTTCATTCATGGAAATGCATCTTGTGGACGACTCACTTATGTCCATTGTAAAGCTGGTCGTGGCCGCAGCACAACAATAGTTATCTGTTATCTGGTGCACCACAAGCAAATGACACCAAGGGAGGCTTATCTCTACGTGAAATCGATTCGGCCAAGGGTGCTGCTAGCTTCTTCTCAATGGGAGGCCGTTCTTGAATACTACCATCTGAAGGTGAAGAGTGTTGTCCCACAACCCTTGGAGTTAAATATGAATTACTTGATACCGTCATCTTCGCAGGATATGGTTCCTTTTGACGATGGTTTAGTAGTGGTGGTAACAGAATCCGATCTCGAAGGGTACGAGCAAAGCATCCAATCTGGCAAAATTGCAAATGAGATATGGGCTGATTTAAGTGCTGTGTACCGTGTTCGTGTTGCTGGTCAGGCTGCAATGGCAAGAGTATCATGCCTATGGCTGCGTTGTCATTGTAATCAAAAGATCACTGCAGAGATTCCAGAGAATTTGAGTAGGGAAGTGAGCTGCTCTACGGGAGCTGATCACCTCGGAGGCATCAGTGTGGGTATTCACGTCTACTAA 1002 0.4611 MHIEELKAEEVGEEEPESSPDEDASGGGSIVPTDVKRLLVGLGARALFYPTLLYNVVRNKIEPEFHWWDKVDEFILLGAVPFPVDVPFLKELGVHGVITLNESYETLVPPSLYQAYGIDHLVIPTRDYCFAPALADICHAVEFIHGNASCGRLTYVHCKAGRGRSTTIVICYLVHHKQMTPREAYLYVKSIRPRVLLASSQWEAVLEYYHLKVKSVVPQPLELNMNYLIPSSSQDMVPFDDGLVVVVTESDLEGYEQSIQSGKIANEIWADLSAVYRVRVAGQAAMARVSCLWLRCHCNQKITAEIPENLSREVSCSTGADHLGGISVGIHVY* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00198 333 Gene3D Protein tyrosine phosphatase superfamily 67 215 IPR029021 -
Pte12g00198 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 59 212 IPR029021 -
Pte12g00198 333 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 297 - -
Pte12g00198 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 67 214 IPR020422 GO:0006470|GO:0008138
Pte12g00198 333 SMART dsp_5 70 211 IPR020422 GO:0006470|GO:0008138
Pte12g00198 333 FunFam Dual specificity phosphatase domain protein 67 214 - -
Pte12g00198 333 Pfam Dual specificity phosphatase, catalytic domain 86 209 IPR000340 GO:0008138|GO:0016311
Pte12g00198 333 MobiDBLite consensus disorder prediction 1 30 - -
Pte12g00198 333 CDD PTPMT1 67 209 IPR044596 GO:0004721
Pte12g00198 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 156 166 IPR016130 GO:0016311|GO:0016791
Pte12g00198 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 135 203 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00198 Pte-Chr12 1608896 1612209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00198 1 334 Protein tyrosine phosphatase (PTP) family AT2G35680 60.000 1.47e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00198 - - zju:107430324 461.455