Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00164 ATGATGGAGATTGGCAAAATCCAGGAGGCTGCCATAATTGGTGGACTCATAGGGCTGCAATGTCTTTATGCAGGGAATGCGGTGGTGCAGAGCTATCTTATGTCTCTGGATCTTCACCCTCTCACCATTGTCATCTTCTATTCCTTTTCTACCTTTGTCGTCGTCTCTCCCTTTGCTTTTTATTTTGAAAGAAACTTCTGGCCCCAGAAATTAAGATTCAAGTTGATTGTTCAGCTCTGTGTCATATCATTAGGAGGGGTAACTTTGTTTCAGTTATTCTTCCTAAAAGGGTTGAAGCAAACTTCACCATCAGCGGGAACTGCAATGCCAAACCTTGCACCAGGACTTATTTTCATCATTGCATGGATTTTTGGTCTGGAGAAAGTCAATCTAAGTTGTCATTTCAGTAAAGTCAAGGTCGTGGGTACGTTGTTATGTGTTGTAGGCGCTCTAACAATGAGCGTAATGCAAAGCACGATCTTGACTGCGAACGAAGCTCAGTTTTCCATGGAAGTACCGAGTTTCCTGGTTGACAAACAGAAAATATTTGGTTCCCTGTATCTTGTGGTTGCAGTGGTCATATTATCAAGCATGATCGTTCTGCAGGCAACTACGTTAGCTGAATTTCCTGCACCGATGTCCTTGTGCGCAATAACATCATTGATTGCAGTGTTCACAACTGCAGCTATACAATTATTTCAAGGTCATAAATTCGAAACTGGTTGGCAACTGTTGAGTTTTGGAGACCTTATTGGCCTTTCCACACTGGCAGGTAGTGTAAGTGGAGCTTGTGTAAGCATAAATGGATGGGCACTCAGGAAGAAAGGACCAGTTTTCATATCCATGTTTAGTCCCCTTGGAACTGTCTGCTCAGTTGTTCTTTCAGCCGTCACTTTGGGAGAAACACCTAATATTGGAAGCCTTGCTGGTATGGTCCTCATGTTCACTGGCCTTTACTTTGTGCTATGGGCTAAAGGGAAAGAAGAATACACTTACCAACGAAGCTTAGATAGTGAGTTCGATCTGGAGAAACCTCTATTAAGTTTGACATAG 1053 0.4274 MMEIGKIQEAAIIGGLIGLQCLYAGNAVVQSYLMSLDLHPLTIVIFYSFSTFVVVSPFAFYFERNFWPQKLRFKLIVQLCVISLGGVTLFQLFFLKGLKQTSPSAGTAMPNLAPGLIFIIAWIFGLEKVNLSCHFSKVKVVGTLLCVVGALTMSVMQSTILTANEAQFSMEVPSFLVDKQKIFGSLYLVVAVVILSSMIVLQATTLAEFPAPMSLCAITSLIAVFTTAAIQLFQGHKFETGWQLLSFGDLIGLSTLAGSVSGACVSINGWALRKKGPVFISMFSPLGTVCSVVLSAVTLGETPNIGSLAGMVLMFTGLYFVLWAKGKEEYTYQRSLDSEFDLEKPLLSLT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00164 350 PANTHER WAT1-RELATED PROTEIN 16 332 IPR030184 GO:0016020|GO:0022857
Pte12g00164 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Pte12g00164 350 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020
Pte12g00164 350 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00164 Pte-Chr12 1395160 1398321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00164 2 339 Nodulin-like Gene Family AT5G47470 56.047 1.66e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00164 - - qsa:O6P43_034088 457.988