Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00151 ATGGAACTGGAGTCAAATCACGTGTCTCCTGTTCTTGCTGATACTGCTCCCATCAACAAGTCAAGATTTGGAGGAATCCTATCAAACCTCTTGCCTTGCTCTCAACAAGAGCCATCACTTTCACCTAGTATGTACATTAAAACTGGTAGAAAAAATTCTGTGAATCTCGATGATGGTCGTTCCAATGGTTGGCTTGATGCAATGAAGGCGTCCTCCCCAACTAGAAAGAAGCTATTCGTTAAGGATAGCAATGTTGAAACTCTTTTCAATGACACTGACTTTGAAGATTACCGGTCCTGGATGGCTGACTACCCCTCAGCTCTTGACTCGTTTGAACAAATCACCATGCTGGCAAAGAATAAGAAGATAGCCATGTTTCTAGATTATGACGGCACCCTCTCACCAATAGTAGATGACCCAGATTGTGCATTTATGTCCGAAGCTATGCGTGCCACTGTGAGAAATGTTGCCAAGTACTTCCCTACGGCAATTATTAGTGGGAGAAGCCGTGATAAGGTGTACGAGTTAGTGAAACTAACAGAGCTGTATTATGCTGGCAGTCATGGAATGGACATCATTGGCCCTGACGGTCCTAACTGTTTTCGATCTACTAACCATCAGGTGAAAGAGAAGAATCTATTTCAGCCTGCCAAAGAATTTATACCCCTGATTGATGAGGTTTTTAAAATCCTCGTTGATAATACTGAAGAAATTGAAGGTGCAAAAGTCGAGAATCATAAGTTTTGTGTTTCTGTACATTATCGTAACGTTGATGAAAAGAACTGGACAACAATTGCTCAATGTGTCCATGACATTCTAACAAATTACCCTCGCTTACGATTGACTCACGGACGGAAGGTTTTAGAAGTGCGTCCTGTGATTGACTGGAACAAAGGAAAAGCAGTTGAGTTTTTGCTGGAGTCTCTAGGACTAATCGATAGGAATGATGTCCTCCCAATTTACATTGGAGATGATAAGACCGATGAAGATGCTTTCAAGGTTCTGATGGAGAGGAAATTGGGTTTTGGGATTCTGGTTTCATCAACTCCTAAAGAAAGCAATGCCTTCTACTCCCTCCATGATCCCTTTGAGGTTATGAAGTTCCTCCAGTCGCTTTTAAATTGGAAGAGCCATGACGGAAGCATCTGA 1149 0.4212 MELESNHVSPVLADTAPINKSRFGGILSNLLPCSQQEPSLSPSMYIKTGRKNSVNLDDGRSNGWLDAMKASSPTRKKLFVKDSNVETLFNDTDFEDYRSWMADYPSALDSFEQITMLAKNKKIAMFLDYDGTLSPIVDDPDCAFMSEAMRATVRNVAKYFPTAIISGRSRDKVYELVKLTELYYAGSHGMDIIGPDGPNCFRSTNHQVKEKNLFQPAKEFIPLIDEVFKILVDNTEEIEGAKVENHKFCVSVHYRNVDEKNWTTIAQCVHDILTNYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLIDRNDVLPIYIGDDKTDEDAFKVLMERKLGFGILVSSTPKESNAFYSLHDPFEVMKFLQSLLNWKSHDGSI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00151 382 FunFam Trehalose 6-phosphate phosphatase 217 293 - -
Pte12g00151 382 SUPERFAMILY HAD-like 124 375 IPR036412 -
Pte12g00151 382 CDD HAD_TPP 124 367 - -
Pte12g00151 382 Pfam Trehalose-phosphatase 126 362 IPR003337 GO:0003824|GO:0005992
Pte12g00151 382 NCBIfam HAD-IIB family hydrolase 125 337 IPR006379 -
Pte12g00151 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 379 IPR044651 GO:0004805|GO:0005992
Pte12g00151 382 Gene3D - 123 219 IPR023214 -
Pte12g00151 382 Gene3D - 225 381 IPR023214 -
Pte12g00151 382 NCBIfam trehalose-phosphatase 121 373 IPR003337 GO:0003824|GO:0005992
Pte12g00151 382 FunFam Trehalose 6-phosphate phosphatase 223 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00151 Pte-Chr12 1192313 1194676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00151 114 372 Trehalose Biosynthesis Gene Families AT1G70290 25.448 6.96e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00151 K01087 - qsa:O6P43_024315 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00151 12 1192313 1194676 Pte12g00151 12 1192313 1194676 RCT