Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00143 ATGCTCTCCATCCAAAATCGTCCATTGACAACAACCATGGCTTGGTATGGCCTTCTCTTGTTACTTGTCCTTTACTTTGCTGGCGTGTCAGAGTCTACCATTTCCAGAAACTCTAATACATCTGACTTTATCGAAACTTCATGCAAGGCAACTCGCTACCCTGGTCTATGCTTTCAGTGCCTTGCAGGCTATGCAAGTGTGATTCATCAAAATGAGCAGCAACTGGCCCTGACTGCCTTGTCAGTGAGCATAGCCAGAGCACGTTTAGCAGCTGATTTTGTGAGAAACATGATTCAAGCAAAGGGGTTAAAGCCTAGGGAGTATCAAGCTCTCAAAGACTGCATCCAAAACATTGGTGATAGCGTGGATCGTTTAAGCCGATCCACTGAGGAGCTTGGTTTGTTGGGACGAACCGTTGGTGCAGACGACTACGAGTGGCATAGGAGCAATTTGCAGACCTGGGTTAGTGCTGCTCTTACGAGCGAGGCAACTTGTCTTTATGGCTTCGCTAGCATGGATGGGAATCTCAAGGTTGCAATTAAGCGCAGGATCACTAGTGTTGCTCAAGTCACTAGTAATGCACTTGCTTTAGTCAATCGCTTTGCAACGAGGCATGCACCAAAAAACCATAATACAGGACCTGAAAAGCATTGA 654 0.4633 MLSIQNRPLTTTMAWYGLLLLLVLYFAGVSESTISRNSNTSDFIETSCKATRYPGLCFQCLAGYASVIHQNEQQLALTALSVSIARARLAADFVRNMIQAKGLKPREYQALKDCIQNIGDSVDRLSRSTEELGLLGRTVGADDYEWHRSNLQTWVSAALTSEATCLYGFASMDGNLKVAIKRRITSVAQVTSNALALVNRFATRHAPKNHNTGPEKH* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00143 217 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 201 IPR035513 -
Pte12g00143 217 NCBIfam pectinesterase inhibitor domain 19 199 IPR006501 GO:0004857
Pte12g00143 217 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 201 IPR035513 -
Pte12g00143 217 Pfam Plant invertase/pectin methylesterase inhibitor 42 197 IPR006501 GO:0004857
Pte12g00143 217 SMART PMEI_2 39 197 IPR006501 GO:0004857
Pte12g00143 217 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 197 - -
Pte12g00143 217 FunFam Pectinesterase inhibitor 3 39 202 - -
Pte12g00143 217 CDD PMEI-like_3 46 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00143 Pte-Chr12 1130544 1131197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00143 27 198 Carbohydrate Esterase AT3G14310 29.944 1.19e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00143 - - qsu:111991575 240.35