Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00122 ATGGATCCGGTTAGCCATTCTCAGCTACCCCCACCTTTTCACACGAGAGATCTCCAGCTACACCATCAATTTCATTCATCGCAACAACGCAACACAGAAGATGAACACAGTGGAAGCACAAGTGGACCGAATCGATCTCAGAAACGGGAACGTGATGACAACAACAACAGTGAAGGAAATGATGGGGTTGGAGGCTCTGGTGGTGACAACGAAATGACAAGAAAACCAAGAGGAAGACCTGCTGGATCCAAGAACAAGCCCAAGCCACCCATTATCATCACTCGTGACAGCGCTAATGCCTTGAGAACTCATGTGATGGAAGTGGCTGACGGGTGCGATATTGTTGAGAGTGTGTCAAACTTTGCCAGGCGTCGCCAAAGAGGGGTTTGTATCATGAGTGGTACCGGTACTGTGACTAATGTCACTCTCAGGCAACCTGCTTCACCTGGTGCTGTTGTAACTCTACATGGCCGGTTTGAGATCTTATCGCTGGCCGGGTCTTTTTTGCCGCCACCGGCACCACCAGCAGCGTCTGGCTTGACTATATATTTGGCAGGTGGACAAGGCCAAGTGGTGGGAGGAAGTGTTGTTGGAACACTGATCGCTTCTGGTCCAGTTGTGATAATGGCTGCTTCGTTCAGTAATGCCGCCTATGAAAGGCTTCCTTTGGATGAAGACGAGCCTCCCATGCCAATGCAAGGTGGAGGTACCATTGAGTCGCCTCCTGGAGCAGTTGGCGGTCAGCAGCATCAGCAGCAACTTCTGGGAGATGCAAATGCAGCACAACTCTTCCTCGGCATGCAACCTAACCTCCTCAATTCCATTCAGATGCCAAACGAGCCATACTGGGCTACTGGTCGGCCTCCATATTGA 873 0.5097 MDPVSHSQLPPPFHTRDLQLHHQFHSSQQRNTEDEHSGSTSGPNRSQKRERDDNNNSEGNDGVGGSGGDNEMTRKPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDEPPMPMQGGGTIESPPGAVGGQQHQQQLLGDANAAQLFLGMQPNLLNSIQMPNEPYWATGRPPY* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00122 290 FunFam AT-hook motif nuclear-localized protein 101 228 - -
Pte12g00122 290 Gene3D - 101 228 - -
Pte12g00122 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 284 IPR014476 GO:0003680
Pte12g00122 290 PIRSF ESCAROLA 14 290 IPR014476 GO:0003680
Pte12g00122 290 MobiDBLite consensus disorder prediction 1 91 - -
Pte12g00122 290 CDD DUF296 102 169 IPR005175 -
Pte12g00122 290 MobiDBLite consensus disorder prediction 18 32 - -
Pte12g00122 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 215 IPR005175 -
Pte12g00122 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 228 - -
Pte12g00122 290 ProSiteProfiles PPC domain profile profile. 98 235 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00122 Pte-Chr12 1023686 1024886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00122 1 291 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 58.551 1.76e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00122 - - cave:132175367 396.356