Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00120 ATGGGTTCTGAGCAGAAAGACGCTACAAGCTATCAGCCTTCGGAGCCGAAATTATGCGCCAACAACTGTGGCTTCTTTGGCAACGCCGGCACCATGAATCTTTGTTCCAAATGCTACCGTGATTACAAGATGGCCCAAGAAAAGCAGGTTTTCGCCAAAGCCGCCATGGAGAAATCCCTCAACCCTGAATCCGTTGATTTTATCGGATTCGCTAGTGCTGGAGAGCCGTACCTTGGCAACTCTTCCTTTGCGTTCTCTTCCGAATCTTCATCGTCTGCCACCTCTGCGTCAACGGCGATGACTTTTGGCAGCGATCATCCGGAGCGGAAGGTTGCTACCCGTTGCGCGAATTGCAACAAGAAGGTGGGTTTGACTGGGTTCCAGTGCAAGTGTGGGAGTACTTTCTGCGGGGTACATCGGTACCCAGAGAAGCACGAATGCGACTTTGATTTTAAAGGTGAGGGACGCGACGCGATTGCCAAGGCCAACCCTTTGGTAAAGACTGATAAGGTCGAGAGGATTTGA 525 0.5124 MGSEQKDATSYQPSEPKLCANNCGFFGNAGTMNLCSKCYRDYKMAQEKQVFAKAAMEKSLNPESVDFIGFASAGEPYLGNSSFAFSSESSSSATSASTAMTFGSDHPERKVATRCANCNKKVGLTGFQCKCGSTFCGVHRYPEKHECDFDFKGEGRDAIAKANPLVKTDKVERI* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00120 174 SMART AN1_Zf_4 115 152 IPR000058 GO:0008270
Pte12g00120 174 Pfam AN1-like Zinc finger 115 151 IPR000058 GO:0008270
Pte12g00120 174 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Pte12g00120 174 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 174 - -
Pte12g00120 174 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Pte12g00120 174 FunFam Zinc finger AN1-type containing 6 87 170 - -
Pte12g00120 174 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 18 62 - -
Pte12g00120 174 Gene3D - 86 170 IPR035896 -
Pte12g00120 174 ProSiteProfiles Zinc finger AN1-type profile. 109 155 IPR000058 GO:0008270
Pte12g00120 174 Gene3D - 4 64 - -
Pte12g00120 174 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Pte12g00120 174 SUPERFAMILY AN1-like Zinc finger 106 169 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00120 Pte-Chr12 1003433 1003957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00120 1 175 C2H2 Transcription Factor Family AT3G52800 40.223 1.66e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00120 - - jre:109010927 221.861