Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00115 ATGTCGAGTGGCAAGCATGTGTTATTTCTCTTTGGGCTCACTTCCATACTTAGCTTCTGCCTGTCGATCCAGGCTACAGACAATGGCTTGAAGACGTATATCATTCAAACCATTAAGCTTGATGCAGCAGGGTATCACTCCCTTATGTCAACTAGCTCGGCAAGTCTGACCCGGCAGCGCTTGGTTTATTCGTACCAGCATGTCATGAATGGCTTTGCTGTAGAATTAACAAAAGAAGACGCAAAAGCTTTGGAAGGAAAGCAAGGGGTTTTGTCAGTCCAACCTGATGAGATGTATTCCTTACACACTACCCACACACCACAGTTTTTGGGCTTGAACGAGAACACAGGATTGTGGAAGGATTCGAATTTTGGCAAAGGAATCATTATTGGAGTCTTGGACACGGGAATAAAGCCTGACCACCCTTCCTTCTCTGCTGACGGAATGCCTCCTCCCCCTGCCAAATGGAAAGGCTTCTGCCAGTTTACCGGTAATACGACTTGCAATAACAAGCTCATCGGTGCAAGAAATCTTTTGAACAACTCAGAAGGAGTTCGAAATGCGCCATTTGATAAAGTTGGGCACGGCACACACACATCCAGTACAGCTGCTGGTACATTTGTAAATGGTGCGAGTGAGCTAGGAATGGCCCAAGGCAAAGCTGCTGGCATGGCACCCTTTGCTCACATAGCGATGTACCAAGTATGCTCCGAAGAAGGCTGCCCTGTGAGTGCCATATTAGCAGCATTTGACGCCGCTATTGAGGATGGCGTGGATATTCTTTCTCTGTCCTTAGGTCGGACTAGAGAGTCAGATCCTTTCTATCAAGACCCTATCGCATTGGGTGCATATGCTGCAGCTCAAAAGGGAATCCTTGTGAGCTGTTCAGCTGGAAATGATGGTCCTTTTGATGGCTCAGTTTCCAATACGGCTCCTTGGTTGCTCACAGTAGGAGCAAGCACCATTGACAGAAGCATCAGAGCAACTGTTAGACTTGGAAATGGAGCGGAATATGATGGAGAATCAGCCTTTCAACCAAAAGATTTTGATCCCAGTCTTCGAGCGCTTGTATTTCCAGGTGCAAATAGAAATGACTCTGTCACCTTTTGTGCCCCAGGATCCTTAAAACACATAGACGTCAAAGGGAAGGTGGTTTTGTGTGTGAGAGGTGGATTAATTTCTAGAGTAGAAAGAGGAGAGGAAGTAAAAAACGCTGGGGGTGCAGCGATGATATTAGTTAACCAGAAAGCTGAAGGATTCAGTGTAATAGCTGATGCTCATGTTCTTCCTGCCTCGCATGTGAGCTATGAGGCAGCATTAAAGATCCAGGCTTACATGAATTCAACTTCAACTCCAACAGCGACAATCATATTCAAAGGGACCATTATCGGAAACAAACTTGCTCCTGAAGTTACGTCCTTCTCTTCTAGAGGTCCAAGCCATGAAAGCCCTGGCATTTTGAAGCCTGACATCATAGGCCCTGGAGTAAACATTTTAGCTGCATGGCCCTTCTCAGTGGATAGTAGCACCAATTCAAATGCAACTTTCTTCATAGCATCAGGCACCTCTATGTCTTGCCCTCACCTTAGCGGCATTGCTGCTCTGCTCAAAAGCGCTCACCCTGATTGGTCCCCTGCCGCTATTAAGTCAGCAATCATGACAACTGCTGATCTGAAAAACCTTGGAGGCCAGGCCATCGTGGATGAAACCCACCAAGTAGCTGACTTGTTCGCCACTGGTGCTGGCCATGTGAATCCATTGAAGGCAAACGATCCCGGGCTTGTTTACGACATCCAACCGGAGGAGTACATTCCATACCTTTGTGGATTGGGATATTCAGACATGAACGTCTCGATCATTGCCAAGCATACGGTGCAGTGCTCACAAGTAAAGCACATTCCAGAAGCACAACTCAATTACCCATCATTTTCTCTTCTGATGGGAAGTGAGACCCAAGGTTACACTAGGACATTGACTAATGTTGGTCCAGCTGATTCAATCTACAAAGTCGAACTAGAGGTACCAGTTGCTTTAGGAATGAGTGTGAACCCAACAACTCTCACATTCACAGAGGTGAATCAAAAGCTGTCCTACTTTGTGGAATTTATCCCTCAGATCAAAGGTAACAGAAAAAAATTGACACACACTCGGGGGTACATCAAATGGGTTTCTGGCAATTACTCTGTCACAAGTCCCATATCCATTGTTTTCGAGTGA 2217 0.461 MSSGKHVLFLFGLTSILSFCLSIQATDNGLKTYIIQTIKLDAAGYHSLMSTSSASLTRQRLVYSYQHVMNGFAVELTKEDAKALEGKQGVLSVQPDEMYSLHTTHTPQFLGLNENTGLWKDSNFGKGIIIGVLDTGIKPDHPSFSADGMPPPPAKWKGFCQFTGNTTCNNKLIGARNLLNNSEGVRNAPFDKVGHGTHTSSTAAGTFVNGASELGMAQGKAAGMAPFAHIAMYQVCSEEGCPVSAILAAFDAAIEDGVDILSLSLGRTRESDPFYQDPIALGAYAAAQKGILVSCSAGNDGPFDGSVSNTAPWLLTVGASTIDRSIRATVRLGNGAEYDGESAFQPKDFDPSLRALVFPGANRNDSVTFCAPGSLKHIDVKGKVVLCVRGGLISRVERGEEVKNAGGAAMILVNQKAEGFSVIADAHVLPASHVSYEAALKIQAYMNSTSTPTATIIFKGTIIGNKLAPEVTSFSSRGPSHESPGILKPDIIGPGVNILAAWPFSVDSSTNSNATFFIASGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTADLKNLGGQAIVDETHQVADLFATGAGHVNPLKANDPGLVYDIQPEEYIPYLCGLGYSDMNVSIIAKHTVQCSQVKHIPEAQLNYPSFSLLMGSETQGYTRTLTNVGPADSIYKVELEVPVALGMSVNPTTLTFTEVNQKLSYFVEFIPQIKGNRKKLTHTRGYIKWVSGNYSVTSPISIVFE* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00115 738 Gene3D - 607 737 - -
Pte12g00115 738 CDD Peptidases_S8_3 99 557 IPR034197 -
Pte12g00115 738 Gene3D Peptidase S8/S53 domain 127 603 IPR036852 GO:0004252|GO:0006508
Pte12g00115 738 ProSiteProfiles Serine proteases, subtilase domain profile. 98 590 - -
Pte12g00115 738 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 130 141 IPR023827 -
Pte12g00115 738 Pfam Peptidase inhibitor I9 53 102 IPR010259 -
Pte12g00115 738 Gene3D - 323 464 - -
Pte12g00115 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 734 IPR045051 -
Pte12g00115 738 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Pte12g00115 738 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Pte12g00115 738 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Pte12g00115 738 Pfam PA domain 369 441 IPR003137 -
Pte12g00115 738 SUPERFAMILY Subtilisin-like 101 594 IPR036852 GO:0004252|GO:0006508
Pte12g00115 738 Pfam Fibronectin type-III domain 637 735 IPR041469 -
Pte12g00115 738 Pfam Subtilase family 125 559 IPR000209 GO:0006508|GO:0008236
Pte12g00115 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 102 IPR037045 -
Pte12g00115 738 FunFam subtilisin-like protease SBT1.5 323 463 - -
Pte12g00115 738 CDD PA_subtilisin_like 329 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00115 Pte-Chr12 977304 979520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00115 60 738 Subtilisin-like Serine Gene Family AT1G04110 46.620 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00115 - - qsa:O6P43_024262 949.503