Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00112 ATGTATTCCTTACACACTACCCACACACCACAGTTTTTGGGCTTGAACGAGAACACAGGATTGTGGAAGGATTCGAATTTTGGCAAAGGAATCATTATTGGAGTCTTGGACACGGGAATAAAGCCTGACCACCCTTCCTTCTCTGCTGACGGAATGCCTCCTCCCCCTGCCAAATGGAAAGGCTTCTGCCAGTTTACCGGTAATACGACTTGCAATAACAAGCTCATTGGTGCAAGAAATCTTTTGAACAACTCAGAAGGAGTTCGAAATGCGCCATTTGATAAAGTTGGGCACGGCACACACACATCCAGTACAGCTGCTGGCACATTTGTAAATGGTGCGAGTGAGTTAGGAATGGCTCAAGGCAAAGCTGCTGGCATGGCACCCTTTGCTCACATAGCGATGTACCAAGTATGCTCCGAAGAAGGCTGCCCCGGGAGTGCCATATTAGCAGCATTTGACGCCGCTATTGAGGATGGCGTGGATATTCTTTCTCTGTCCTTAGGTCGGACTAGAGAGTCAGATCCTTTCTATCAAGACCCTATCGCATTGGGTGCATATGCTGCAGCTCAAAAGGGAATCCTTGTGAGCTGTTCAGCTGGAAATGCTGGTCCTTTTGACGGCTCAGTTTCCAATACGGCTCCTTGGTTGCTCACGGTAGGAGCAAGCACCACTGACAGACACATCAGAGCAACTGTTAGACTTGGAAATGGAGCGGAATATGATGGAGAATCAGCCTTTCAACCAAAAGATTTTGATCCCAGTCTTCGAGCGCTTGTATTTCCAGGTGCAAATAGAAATGACTCTGTCACCTTTTGTGCCCCAGGATCCTTAAAAAACATAGATGTCAAAGGGAAGGTGGTTTTGTGTGTGAGAGGTGGATTAGTTTCTAGAGTAGAAAAAGGAGAGGAAGTAAAAGACGCTGGGGGTGCAGCTATGATATTAGTTAGCCAGAAAGCTGAAGGATTCAGTTTAATAGCTGATACTCATGTTCTTCCTGCCTCGCAAGTGAGCTATGAGGCAGCATTAAAGATCCAGGCTTACATGAATTCAACTTCAACTCCAACAGCGACAATCATATTCAAAGGGACCATTATCGGCAACAAACTTGCTCCTGAAGTTACATCCTTCTCTTCTAGAGGTCCAAGCCATGAAAGCCCTGGCATTTTGAAGCCTGACATCATAGGCCCTGGAGTAAACATTTTAGCTGCATGGCCCGTCTCGGTGGATAGTAGCACCAATTCAAATGCAACTTTTTTCATAGAATCAGGTACCTCTATGTCTTGCCCTCACCTTAGCGGCATTGCTGCTCTGCTCAAAAGCGCTCACCCTGAGTGGTCCCCTGCCGCTATTAAGTCAGCAATCATGACAACTGCTGATCTGAAAAACCTTGGAGGCCAGGCCATCGTGGATGAAACCCACCAAGTAGCTGACTTGTTCGCCACTGGTGCTGGCCATGTGAATCCATTGAAGGCAAACGATCCCGGGCTTGTTTACGACATCCAACCGGAGGAGTACATTCCATACCTTTGTGGATTGGGATATTCAGACATGAACGTCTCGATCATTGCCAAGCATATGGTGCATTGCTCACAAGTAAAGCGCATTCCAGAAGCACAACTCAATTACCCATCATTTTCTCTTCTGATGGGAAGTGAGACCCAAGGTTACACTAGGACATTGACTAATGTTGGTCCAGCTGATTCAATCTACAAAGTCGAACTAGAGGTACCAGTTGCTTTAGGAATGAGTGTGAACCCAACAACTCTCACATTCACAGAGGTGAATCAAAAGCTGTCCTACTTTGTGGAATTCATCCCTCAGATCAAAGGTAACAGAAAAAATTTGACACACACTCGGGGGTACATCAAATGGGTTTCTGGCAATTACTCTGTCACAAGTCCCATATCCATTGTTTTCGAGTGA 1926 0.4621 MYSLHTTHTPQFLGLNENTGLWKDSNFGKGIIIGVLDTGIKPDHPSFSADGMPPPPAKWKGFCQFTGNTTCNNKLIGARNLLNNSEGVRNAPFDKVGHGTHTSSTAAGTFVNGASELGMAQGKAAGMAPFAHIAMYQVCSEEGCPGSAILAAFDAAIEDGVDILSLSLGRTRESDPFYQDPIALGAYAAAQKGILVSCSAGNAGPFDGSVSNTAPWLLTVGASTTDRHIRATVRLGNGAEYDGESAFQPKDFDPSLRALVFPGANRNDSVTFCAPGSLKNIDVKGKVVLCVRGGLVSRVEKGEEVKDAGGAAMILVSQKAEGFSLIADTHVLPASQVSYEAALKIQAYMNSTSTPTATIIFKGTIIGNKLAPEVTSFSSRGPSHESPGILKPDIIGPGVNILAAWPVSVDSSTNSNATFFIESGTSMSCPHLSGIAALLKSAHPEWSPAAIKSAIMTTADLKNLGGQAIVDETHQVADLFATGAGHVNPLKANDPGLVYDIQPEEYIPYLCGLGYSDMNVSIIAKHMVHCSQVKRIPEAQLNYPSFSLLMGSETQGYTRTLTNVGPADSIYKVELEVPVALGMSVNPTTLTFTEVNQKLSYFVEFIPQIKGNRKNLTHTRGYIKWVSGNYSVTSPISIVFE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00112 641 Gene3D - 510 640 - -
Pte12g00112 641 Pfam Subtilase family 28 462 IPR000209 GO:0006508|GO:0008236
Pte12g00112 641 Pfam Fibronectin type-III domain 540 638 IPR041469 -
Pte12g00112 641 CDD PA_subtilisin_like 232 359 - -
Pte12g00112 641 SUPERFAMILY Subtilisin-like 4 497 IPR036852 GO:0004252|GO:0006508
Pte12g00112 641 CDD Peptidases_S8_3 2 460 IPR034197 -
Pte12g00112 641 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 637 IPR045051 -
Pte12g00112 641 SUPERFAMILY PA domain 278 376 IPR046450 -
Pte12g00112 641 PRINTS Subtilisin serine protease family (S8) signature 94 107 IPR015500 -
Pte12g00112 641 PRINTS Subtilisin serine protease family (S8) signature 28 47 IPR015500 -
Pte12g00112 641 PRINTS Subtilisin serine protease family (S8) signature 423 439 IPR015500 -
Pte12g00112 641 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 33 44 IPR023827 -
Pte12g00112 641 Pfam PA domain 272 344 IPR003137 -
Pte12g00112 641 Gene3D Peptidase S8/S53 domain 30 506 IPR036852 GO:0004252|GO:0006508
Pte12g00112 641 FunFam subtilisin-like protease SBT1.5 226 366 - -
Pte12g00112 641 Gene3D - 226 367 - -
Pte12g00112 641 ProSiteProfiles Serine proteases, subtilase domain profile. 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00112 Pte-Chr12 931056 932981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00112 1 641 Subtilisin-like Serine Gene Family AT1G04110 46.875 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00112 - - qsa:O6P43_024262 885.945