Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00106 ATGGCTGGGTGTAGTGATAAACAGTCAATCAAGTACAGTTCAAACAAAGATGGGGGTTCATCCTTGGATATCGATTGTTCAGGTGAAGAGTATGTGGCTATCATCTCTGATAAGATAAGCAAGCAATGCTGCAACAAATTGGTGACAAAGCCACCACAGGTATTAAGCATGGCTGAGCTTACCTCAGCAGTTGGACTGGTGTGGGATGCGGCAGGTCAACCGCTCTCCTTTTCCCAGCATAAGGAAAATGATAAGGACGGACAGAAAGAAAGCCTTTTGAGTAATTTTAGTGTAGAAGGAAACAGGGAGATGTTAATTTCATCTGGTAGTGATTATATTTGCATTGACATGACAACTACTAATGTTTTCCCACCCTTGGTGAAGCCGAGATTAGATTTCCCCAAGATAGTGCAGAAGGTATCCAGCGTTGAATCTTCGAGAAAGAATCAACATTTCATGAATCTATTTCACGCACCTTGTCACGGTAGAACTCAAATGTCAAATGAGTGCTGGAAAAATGAGGGATTTTTTAGCATGCGAATATCTTCTGAATTGAGGGATATATATCGATGGATGAGTAGTAGGAAAGCTCCTTGCAACAATTTCAAACCTGAGAATACAAGAAATTCAGAATCCATCCTCCCTGGTAATACTATCATAGTTGATGGGGTTTCAGCAGAGACAAATACCACTGCTTTTGTATCTGGAGGTGCTGCCATTTGCACCGGTTCTATTACGTCAAAGAATTTACCATCCTCAAAAGATATGAAGCTTGAAAGGGGTACAATCAGATGCCCCTCTCTTTTTTCTGACTACTATGTGGGGGCTGTTGAAGATACCAAGTTGGCTAGAATCTCCTGTTCCAAACTTTGTTCAGATTATCACATTAACAGTGTGGCTATTTGTAGAAGAGTTTTTGATGAATGTAAACATAAAAATGATGTTAGGGAGATGCTAGATGACCAAAGAGACCAAAGTGAGAAGTTTTTAGTCGGTGAATCCAGCATTGACGTCTCATCTTTAGCTAGAAGACATGTTTATCATCCCCTTGCCAAGCAAAAGCATGCTGTTGCTGGGGCATTGGCTGGTACATTTGTTAGCCTTTGTCTTCATCCTGTTGATACCATAAAGACAGTTGTTCAGTCATGTCATTCGGAGCACAGATCTCTCTTCTACATAAGCAAATCCATTGTCTCCGATAGAGGTATACCTGGACTTTATCGAGGAATTGCTACCAATATTGTATCTTCTGCTCCAATTTCTGCAGTTTACACACTCACTTATGAATCAGTCAAAGCATATTTGCTTCCTCTTTTTCCAACGGAGTGTCACTCTTTTGCCCATTGTATGGCAGGTGGCTGTGCCAGCATTGCAACTTCATTTATTTTTACTCCTAGTGAGCGCATAAAGCAACAGATGCAAGTAGGATCACATTACCGCAACTGTTGGGATGCTGCTATGGGAATCATTAGAAAAGGCGGTTTGTCTTCATTATATGCCGGATGGGTTGCTGTGCTCTGTAGAAATGTTCCCCACTCAGTTATCAAGTTTTATACTTACGAAAGCTTGAAGCAAGTGATGTTATCATCTCTACAAACTAGCGGTCAACTTAACACATTACAGACTTTGGTTTGTGGAGGACTAGCTGGATCAACTGCTGCCATGTTCACAACTCCTTTTGATGTGGTGAAAACGAGACTACAAACACAGATTCCAGGATCCACCAATCGTTATGTCAGTGTACTTCACATCCTGTATAGCATTAGTAAAAACGAAGGTTTCAAAGGTCTCTACAGGGGATTGACGCCAAGACTGGTTATGTACATGTCTCAAGGAGCTCTATTCTTTGCTTCATACGAACTTCTGAAGAGCTTGTTTTCTTCTTTAGAAGCTTCACATACTGCTTCCGTCCAATCCAATGACAAGAAAGATTGA 1935 0.4109 MAGCSDKQSIKYSSNKDGGSSLDIDCSGEEYVAIISDKISKQCCNKLVTKPPQVLSMAELTSAVGLVWDAAGQPLSFSQHKENDKDGQKESLLSNFSVEGNREMLISSGSDYICIDMTTTNVFPPLVKPRLDFPKIVQKVSSVESSRKNQHFMNLFHAPCHGRTQMSNECWKNEGFFSMRISSELRDIYRWMSSRKAPCNNFKPENTRNSESILPGNTIIVDGVSAETNTTAFVSGGAAICTGSITSKNLPSSKDMKLERGTIRCPSLFSDYYVGAVEDTKLARISCSKLCSDYHINSVAICRRVFDECKHKNDVREMLDDQRDQSEKFLVGESSIDVSSLARRHVYHPLAKQKHAVAGALAGTFVSLCLHPVDTIKTVVQSCHSEHRSLFYISKSIVSDRGIPGLYRGIATNIVSSAPISAVYTLTYESVKAYLLPLFPTECHSFAHCMAGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDAAMGIIRKGGLSSLYAGWVAVLCRNVPHSVIKFYTYESLKQVMLSSLQTSGQLNTLQTLVCGGLAGSTAAMFTTPFDVVKTRLQTQIPGSTNRYVSVLHILYSISKNEGFKGLYRGLTPRLVMYMSQGALFFASYELLKSLFSSLEASHTASVQSNDKKD* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00106 644 Pfam Mitochondrial carrier protein 444 528 IPR018108 -
Pte12g00106 644 Pfam Mitochondrial carrier protein 354 435 IPR018108 -
Pte12g00106 644 Pfam Mitochondrial carrier protein 536 627 IPR018108 -
Pte12g00106 644 SUPERFAMILY Mitochondrial carrier 352 622 IPR023395 -
Pte12g00106 644 MobiDBLite consensus disorder prediction 1 20 - -
Pte12g00106 644 FunFam Mitochondrial substrate carrier protein-like 477 639 - -
Pte12g00106 644 ProSiteProfiles Solute carrier (Solcar) repeat profile. 443 526 IPR018108 -
Pte12g00106 644 ProSiteProfiles Solute carrier (Solcar) repeat profile. 537 625 IPR018108 -
Pte12g00106 644 FunFam Mitochondrial substrate carrier protein-like 329 476 - -
Pte12g00106 644 Gene3D Mitochondrial carrier domain 444 640 IPR023395 -
Pte12g00106 644 Gene3D Mitochondrial carrier domain 328 443 IPR023395 -
Pte12g00106 644 ProSiteProfiles Solute carrier (Solcar) repeat profile. 350 434 IPR018108 -
Pte12g00106 644 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 343 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00106 Pte-Chr12 892732 897676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00106 357 629 Chloroplast and Mitochondria Gene Families AT1G07030 34.164 5.23e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00106 - - mdm:114825639 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00106 12 892732 897676 Pte12g00106 12 892732 897676 RCT