Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00099 ATGAGATCTTTCACTTCTTTTATGTTATTGTATTTGATTTCCACGGTTATTTTCGTCGCTGGCAGTGATTTTCCGTCAAATGAAGTTTGGGCGCTGACAGCCTTCAAAGAAGCTATATTTGAAGACCCATATCTAGTTTTATCCAATTGGAATGGGCTAGATGCAGATCCTTGCAACTGGACTGGCGTTTTTTGCTCTCAACTTAGGAATCATGTTGTTAAGCTAAACATATCTGGCTCATCGTTGCGGGGATTCCTGGCACCTGAATTGGGCCAAATTACATATATGCAAGAACTGATATTACATGGAAACAATTTCATTGGAGCTATACCTAAGGAACTGTTCGTGTTGAAGAACCTCAAGGTCTTGGATTTGGGGAAGAATCAATTGACAGGACCAATTCCTCCAGAGATCGGAAACTTAACCAGTGTTGAGAAAATAATTTTGCAGTCTAATGGGCTAACTGGGAGGCTGCCTTCTGAACTTAGTCAATTGAGAAACCTCCAAGAGCTTCGGCTGGACAGAAATAAGTTGCAAGGATCAGTTCCTGCCAGTGGCAGTTCAAATTTCGCATCTATAAAACAAGGGAAGACCTTCAGGTATGCATTAACTGGCTTCTGCCAGTCATCTCAGTTAAAAGCTGCTGACTTTTCATATAACTTCTTGGCCGGCAGCATACCGAAGTGCTTGGATTTTCTTCCGAGGTCAAGCTTTCAAGGTAATTGCTTTGAGAATGAAGATGTAAAGCAGCGCTCTACAGCACAATGTGGCAAATTTGTGGGTAATGCTGGACCACCACCTGTCAAGAACCACACTGGGACCACATATAAGCACAGGGCTGCAGGAGATGTGTCTAAGCATCGAGGCGTATCAAAACCAATTTGGCTTTTGGCTCTAGAAATTGTGACAGGAACTATGGTGGGTTCTATATTCCTAGTTGCTGCTCTCACTGCCTTTCAAAGGTGTAACAGTAGGTCATCCATCATTATCCCTTGGAAGAAATCTACTAGCGGGAAGGATGATCTGACAGTATATATAGATTCTGAGTTGTTGAAAGATGTAGTGAGGCATAGCAGACAAGAGCTCGAAGTAGCATGTGAAGATTTTAGCAACATTATTGGATCCTCACCTGACAGTGTGGTCTACAAAGGCAACTTCACCGGAGGGTCCGAAATTGCTGTTATTTCACTCTGCATTAAAGAGGAAAACTGGACAGGATATCTTGAACTCTATTTCCAGAGAGAGGTTGCAGAGTTGGCAAGATTAAACCATGAACATACAGGAAAACTTCTTGGCTATTGTAGAGAGAGTAATCCTTTTACAAGGATGCTGGTTTTTGAATATGCTTCGAATGGGACACTTTATGAGCACCTTCACTATGGGGAGGGATGCCAATTATCTTGGACACGGCGGATGAAAATTATAATAGGCATAGCTCGTGGCCTCAAGTATCTTCATACAGAAGTTGACCCTCCTTTCAGTATATCAGAGCTGAATTCTAGTGCTGTTTACCTTACTGATGATTTTTCACCCAAGCTTGTTGATTTTGAAAGTTGGAAGACGATTCTTGAAAGATCTGAAAGAAACTCCGGTTCTATAAGCAGTCAGGGTGCTATTTGCGTTCTTCCAAATTCTCTGGAGGCACGCCATCTGGATATCCGAGGCAATGTGTATTCATTTGGTGTACTTCTACTGGAGATTATTAGCGGCAGGCCTCCATTCTGCAAAGACAAAGGGTGCTTGGTGGATTGGGCGAAGGAGTATCTTGATCTGCCAGAAGCAATGTCGTATGTGGTGGACCCTGAATTGAAGCATTTTGGATATGAAGACCTTAAGGTAATTTGTGAGGTGATAAGCTTGTGTATTAATCCAGACTCCGCGAAGCGACCCTCCATGCAAGAAATTTGCAGCATGTTGGAGAGCAGAATTGACACATCAATGAGCATTGAGTTGAAATCATCTTCTCTTGCTTGGGCTGAACTTGCTCTGTTATCATGA 1998 0.4259 MRSFTSFMLLYLISTVIFVAGSDFPSNEVWALTAFKEAIFEDPYLVLSNWNGLDADPCNWTGVFCSQLRNHVVKLNISGSSLRGFLAPELGQITYMQELILHGNNFIGAIPKELFVLKNLKVLDLGKNQLTGPIPPEIGNLTSVEKIILQSNGLTGRLPSELSQLRNLQELRLDRNKLQGSVPASGSSNFASIKQGKTFRYALTGFCQSSQLKAADFSYNFLAGSIPKCLDFLPRSSFQGNCFENEDVKQRSTAQCGKFVGNAGPPPVKNHTGTTYKHRAAGDVSKHRGVSKPIWLLALEIVTGTMVGSIFLVAALTAFQRCNSRSSIIIPWKKSTSGKDDLTVYIDSELLKDVVRHSRQELEVACEDFSNIIGSSPDSVVYKGNFTGGSEIAVISLCIKEENWTGYLELYFQREVAELARLNHEHTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHYGEGCQLSWTRRMKIIIGIARGLKYLHTEVDPPFSISELNSSAVYLTDDFSPKLVDFESWKTILERSERNSGSISSQGAICVLPNSLEARHLDIRGNVYSFGVLLLEIISGRPPFCKDKGCLVDWAKEYLDLPEAMSYVVDPELKHFGYEDLKVICEVISLCINPDSAKRPSMQEICSMLESRIDTSMSIELKSSSLAWAELALLS* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00099 665 PANTHER PROTEIN MALE DISCOVERER 2 7 665 - -
Pte12g00099 665 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Pte12g00099 665 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pte12g00099 665 SUPERFAMILY Protein kinase-like (PK-like) 348 640 IPR011009 -
Pte12g00099 665 Gene3D Transferase(Phosphotransferase) domain 1 449 655 - -
Pte12g00099 665 SUPERFAMILY L domain-like 27 233 - -
Pte12g00099 665 FunFam Inactive receptor-like serine/threonine-protein kinase 341 448 - -
Pte12g00099 665 Gene3D Ribonuclease Inhibitor 141 260 IPR032675 -
Pte12g00099 665 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Pte12g00099 665 Pfam Protein tyrosine and serine/threonine kinase 371 639 IPR001245 GO:0004672|GO:0006468
Pte12g00099 665 ProSiteProfiles Protein kinase domain profile. 367 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00099 665 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Pte12g00099 665 SMART LRR_typ_2 117 141 IPR003591 -
Pte12g00099 665 SMART LRR_typ_2 165 188 IPR003591 -
Pte12g00099 665 Gene3D Phosphorylase Kinase; domain 1 334 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00099 Pte-Chr12 842179 846076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00099 7 640 Receptor kinase-like Gene Family AT2G01210 26.491 2.00e-57 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte12g00099 PK_Tyr_Ser-Thr 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00099 - - qsu:112038237 1004.2