Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00085 ATGGCAGCCAACACTTTGATGGGCCATGGCCTAGTGACTGCTACAGTCTTCCGTTCAGGACTTTCTTCTTACAAGTCCAGATTTTCCACTGCACTTGCTGCGGTTGCCAATGGGCGTAGTCGTTTGACAATGTCAGCGGACTGGATGCCCGGCCAACCTAGACCATCCTACCTCGATGGCTCAGCCCCTGGTGACTTCGGATTTGATCCACTTCGTCTAGGGGCAGTACCTGAGAACCTGGAGAGATTCAAGGAGTCAGAACTAATTCACTGCAGATGGGCTATGCTTGCTGTTCCGGGAATTCTGGTTCCAGAGGCCCTGGGTTATGGTAACTGGGTGAAAGCTCAAGAATGGGCTGCAATTCCAGGAGGTCAAGCTACTTATCTTGGTAACCCTGTTCCTTGGGGTACCCTTCCGACCATTTTAGTGATAGAATTCCTTTCCATTGCCTTTGTGGAACACCAAAGAAGTATGGAGAAAGACCCAGAGAAGAAGAAATATCCTGGTGGGGCTTTTGACCCTCTGGGATATTCCAAGGACCCTGCAAAATTTCAAGAATACAAAGTCAAAGAAATAAAAAATGGGCGGCTAGCTTTGTTGGCTTTCGTGGGCTTTTGTGTTCAGCAATCAGCTTACCCTGGGACTGGACCACTTGAGAACTTGGCAACTCACTTGGCTGATCCATGGCACAACAACATAGGAGATATCATTATCCCTAAATCATTCCTGCCATGA 735 0.483 MAANTLMGHGLVTATVFRSGLSSYKSRFSTALAAVANGRSRLTMSADWMPGQPRPSYLDGSAPGDFGFDPLRLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPAKFQEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPKSFLP* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00085 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 45 236 IPR001344 GO:0009765|GO:0016020
Pte12g00085 244 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Pte12g00085 244 SUPERFAMILY Chlorophyll a-b binding protein 41 238 - -
Pte12g00085 244 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Pte12g00085 244 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00085 Pte-Chr12 754895 756020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00085 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 78.283 6.71e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00085 K08907 - jre:109006875 439.113