Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00082 ATGGGTAAGGCATTCAGGTGGTTTCGTAGTCTTCTGGGGTTGAAGAAATCCGACCATTCGTCTCCTCAATCAACTTTCTCAGCTTCAAAGCCACCGATGAGAGAGAGAAGGAGATGGAGTTTCGTCAAATCTCACAGAGAGAAAGACCCCCATAACAAGCAGCAACACCCCCAAGACCGTTGCTCCACCGTAACCCGTAAGGGCGATGCTAAAACAAGCGGAATTGGTGTACATGGAGATGCTTTATCTGATCATGAAAAACACAGCAAAACCGGAATCGCTGTGGCTAATCCCACCGTGGCAGCTCCAGCAGGAGCAGTGGCTGCTACCCAAGGTTCCGCCAGTGCTGTCACATTGACTAGCAGTGGCAGATGTACTGGTGAATTGCCTGAAAAGTTAGCACTTGGCAGTAGAAGAGTTGCAGTACAGCAAGAACTGGCCGCGGTTAAGATTCAAGCTATCTTTCGAGGCTGTCTGGCCAGGAGAGCTCTCCGAGCTTTGAAAGGACTGGTGAGGCTTCAAGCTTTGGTAAGAGGTCATATTCAAAGGAAGCAGACAGCGGAGTGGCTGAACCAGATGCAGGCAATAATTCGATTGCAAACGAGAGCTCGGGCCGGAAGGGTTCATAGCTCGGAATCCTCATATTCAAGTAACAAGTCATGTCACACTCAGCACCCAGCCCCGGCAACCCCAGAGAAATCTGAACATACCGTTAGATCCAGGAGTATCAAATATGATCAATCAGCAATGCTCAAGAGAAATGGTTCAAAATGTAAGGCTAGGGTCCGTGGCAGTCATGACAAGCTTTGGGGTAGGGATGATGTTGGATTGGATGAAAATCAGTGGGATCAACTAAAAACTTCCGTAAGAGTTTGTGATAAGAATATTGAAATGGATAGTGGGCACAACATGGCGCCGAAAAGCAAAAGTCACTTTCAGTCAAACCAAATTTCCATGGTTTCGGATCAATCTAGTCGCAGTTTCACTACTTCAAAGGATGCCATATCCCAGCAGTCTGGTCCAAGCCCGTCGTGTTGTGAAGTTCAATCGTTCAGCCCATTCGAACTCAGAGACGAGGATGATGAAAGCCCCTTCTGCACCGCTGAAAACAGTCCTCGATTCTTTTCTTCCTCGACAATTGGTGGCAGCTCCAACATGGGTCGTTTCACCCCCACCAAGAGTGATGGTTGCAGAAGGTATGACATTGGTTATTCAGACTATCCCAGTTACATGTGTTACACTGAATCATCCAAGGCCAAAGTGAGGTGTCTCAGCGCTCCGAAACAGAGACCTCAGTATGAGAGGTCTAGCTCGTCGAAGGGGTACTCCATCCATGGATTAGGTGAATCGAGACTGACTTCGCAGAAGGCATTGCAGTCAAGCTTCACCAGCAAGGCATATCCTGGCTCTGGTCGCTTGGATAAGTTGGGAATGCCTTTAGGCTATAGGTTTTAA 1455 0.4811 MGKAFRWFRSLLGLKKSDHSSPQSTFSASKPPMRERRRWSFVKSHREKDPHNKQQHPQDRCSTVTRKGDAKTSGIGVHGDALSDHEKHSKTGIAVANPTVAAPAGAVAATQGSASAVTLTSSGRCTGELPEKLALGSRRVAVQQELAAVKIQAIFRGCLARRALRALKGLVRLQALVRGHIQRKQTAEWLNQMQAIIRLQTRARAGRVHSSESSYSSNKSCHTQHPAPATPEKSEHTVRSRSIKYDQSAMLKRNGSKCKARVRGSHDKLWGRDDVGLDENQWDQLKTSVRVCDKNIEMDSGHNMAPKSKSHFQSNQISMVSDQSSRSFTTSKDAISQQSGPSPSCCEVQSFSPFELRDEDDESPFCTAENSPRFFSSSTIGGSSNMGRFTPTKSDGCRRYDIGYSDYPSYMCYTESSKAKVRCLSAPKQRPQYERSSSSKGYSIHGLGESRLTSQKALQSSFTSKAYPGSGRLDKLGMPLGYRF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00082 484 MobiDBLite consensus disorder prediction 207 241 - -
Pte12g00082 484 MobiDBLite consensus disorder prediction 31 66 - -
Pte12g00082 484 SMART iq_5 166 187 IPR000048 GO:0005515
Pte12g00082 484 SMART iq_5 143 165 IPR000048 GO:0005515
Pte12g00082 484 Gene3D - 143 186 - -
Pte12g00082 484 MobiDBLite consensus disorder prediction 430 445 - -
Pte12g00082 484 MobiDBLite consensus disorder prediction 16 83 - -
Pte12g00082 484 Pfam IQ calmodulin-binding motif 171 185 IPR000048 GO:0005515
Pte12g00082 484 Pfam IQ calmodulin-binding motif 147 165 IPR000048 GO:0005515
Pte12g00082 484 ProSiteProfiles IQ motif profile. 144 172 IPR000048 GO:0005515
Pte12g00082 484 MobiDBLite consensus disorder prediction 207 227 - -
Pte12g00082 484 MobiDBLite consensus disorder prediction 298 347 - -
Pte12g00082 484 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Pte12g00082 484 ProSiteProfiles IQ motif profile. 168 195 IPR000048 GO:0005515
Pte12g00082 484 MobiDBLite consensus disorder prediction 16 30 - -
Pte12g00082 484 MobiDBLite consensus disorder prediction 306 347 - -
Pte12g00082 484 Pfam Protein of unknown function (DUF4005) 381 438 IPR025064 -
Pte12g00082 484 MobiDBLite consensus disorder prediction 426 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00082 Pte-Chr12 737788 740950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00082 145 485 IQD Protein Family AT4G23060 42.493 7.08e-63 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00082 - - qsa:O6P43_024223 475.322