Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00081 ATGTTGGCTGGGTGCTCTGGTTCAACATTGTTGTCGTCACCGAGGCATAGATTGAGGAGCGAAGCATCTGCGCAGTTCCAACCTTGTCATTTCCAGTTGCCTTCCATGAGCACACAGAGACTGGACTTACCATGTAGTTTCTCCCGCAAAGACACCTCGCGCTCACAGTCCATCAGGCCAGTGGAGAAGCAGATTGAAGGTAAGCCTACCAGCAGTTGTTCTCTTAAGCAGAATATTCGACTTCCACCACTGGCAGCGACAACGCAGGCTACAACCGGACAAACGGCGTTTATTGAAGGCAGGAAGGAGATCAAAGAGGAATTCTGGGACAAGGGTAAGAACTTGAAGAGATATGCGGAACAGGGATCCGTGGAAGATTCCATCGTTAACAGAGCTAAGAGGAAGAAAGGTAGCAGTGATAATGGCAATGGCAAATCTGATGATATTATGGAAGTTGGGGAGAGTTTGAGTTTGAGCCAACTGGGTGCTGGGAATTTTTGGTTTCGGCCGGGCTTTGAGGTTCCCAGATCGATTCAAAGCATTGCAGGCCTTAATCTTCCACAGCTTCCTTTCTCTATGACATGTTCCGGAGATGAAGAAAGGGTCTGCTTTGTACCTGCTGAAGTGATCTCTCCACCATTGCCACTTTCAAATAATCATTGGTTGGACTCTGTTGTTACAGAGATCACTGACTTGGGTGAGAAAGATGGTGAGACAAGCCACCATCGACCTGTGAAGGAAGCCTCTGGTTCAAGTGCTTCTTCAGAAAGTCAAAGCTTGGCACTCAGGCTAAATGAGATTGCAGAACATGGATATGAAGTAGGCAATGGTTCAAAGAATCCTAACCCCCATGATGGCACAGAGTTGGAGACAAGGGAGGACGATGACCAAGAGGAGCGCAAGGGGTTTGAGCTTGTTAGCTTACTTACAGCTTGCGTTGAAGCAATTGGGTTAAGAGATGTCACCGCTGTTCATCACTGCATTGCCAGATTGGGTGATCTTGCTTCTCCAAGAGGAACTTCAATTAGTCGGCTTTCCGCTTATTTCACAGAAGCTCTGGCCATAAGAGTCACTAGACTTTGGCCCCAATTGTTTCATATCACAATCCCTCGAGAGATTGATAGAATGGAAGATGACTCAGGCACTGCAATGAGACTCCTTAATCAGGTGACCCCGATTCTTAAGTTTCTTCACTTCACTTCAAATGAGATTCTGCTAAGAGCTTTTGAAGGAAAAGACAGGGTTCACATCATAGATTTTGACATCAAGCAAGGTCTGCAATGGCCTAGTTTGTTCCAGAGCTTAGCGTCTAGGCCTAACCCTCCGAGCCATGTTAGGATCACTGGTATTGGAGAATCGAAGCAAGACCTGAACGAAACGGGTGACAGACTCGCTGGATTTGCTGAGGCTTTGAACCTACATTTCGAGTTCCATCCAGTTGTGGATAGGTTGGAAGATGTGAGACTTTGGATGCTCCATGTGAAGGAACAAGAAAGTGTAGCCGTCAACTGTGTTTTCCAACTGCACAAGACACTATATGATGGGAATGGAGCAGCAGTGAGAGATTTTCTGGGGCTTATCCGAAGCACCAACCCCACAGTCGTGGTCATGGCAGAACAAGAGGCAGAGCATAATGACTTGAGATTGGAGACCAGGTTCATCAATTCATTCAAGTACTATTGTGCTCTGTTTGACGCCATTGATTATAGCCTTCCACTGGAAAGCCCAGTGAGGACGAAAATCGAGGAGATGTTCGCCAGGGAAATTAGGAATGTGATTGCTTGTGAAGGAAGCGACAGGTTGGAGAGGCATGAGAGGTTTGAGAAATGGAGGAGAATGATGGAGCATCAAGGAGGGTTCAGAAACTTGGGGGTTACAGAAAGGGAAATGATGCAGAGCCAGTTGCTGTTGAAGATGCACAGTTGCGAGAATTACAGAGTAAAGAAGCAAGGAGAAGGAGAAGAAATGGCGGCACTGACTCTGAGCTGGTTAGATCGGCCACTGTACACAGTCTCAGCGTGGACACTGGTTGATGTTGCAGGAAGCTCATCCTCTTATTCTCAACCAAGCTAG 2073 0.4699 MLAGCSGSTLLSSPRHRLRSEASAQFQPCHFQLPSMSTQRLDLPCSFSRKDTSRSQSIRPVEKQIEGKPTSSCSLKQNIRLPPLAATTQATTGQTAFIEGRKEIKEEFWDKGKNLKRYAEQGSVEDSIVNRAKRKKGSSDNGNGKSDDIMEVGESLSLSQLGAGNFWFRPGFEVPRSIQSIAGLNLPQLPFSMTCSGDEERVCFVPAEVISPPLPLSNNHWLDSVVTEITDLGEKDGETSHHRPVKEASGSSASSESQSLALRLNEIAEHGYEVGNGSKNPNPHDGTELETREDDDQEERKGFELVSLLTACVEAIGLRDVTAVHHCIARLGDLASPRGTSISRLSAYFTEALAIRVTRLWPQLFHITIPREIDRMEDDSGTAMRLLNQVTPILKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRPNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLHFEFHPVVDRLEDVRLWMLHVKEQESVAVNCVFQLHKTLYDGNGAAVRDFLGLIRSTNPTVVVMAEQEAEHNDLRLETRFINSFKYYCALFDAIDYSLPLESPVRTKIEEMFAREIRNVIACEGSDRLERHERFEKWRRMMEHQGGFRNLGVTEREMMQSQLLLKMHSCENYRVKKQGEGEEMAALTLSWLDRPLYTVSAWTLVDVAGSSSSYSQPS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00081 690 MobiDBLite consensus disorder prediction 129 148 - -
Pte12g00081 690 MobiDBLite consensus disorder prediction 234 257 - -
Pte12g00081 690 MobiDBLite consensus disorder prediction 272 298 - -
Pte12g00081 690 Pfam GRAS domain family 305 675 IPR005202 -
Pte12g00081 690 ProSiteProfiles GRAS family profile. 296 675 IPR005202 -
Pte12g00081 690 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 253 671 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00081 Pte-Chr12 719822 722983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00081 1 675 GRAS Transcription Factor Family AT1G63100 53.922 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte12g00081 GRAS 6.7e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00081 - - qsa:O6P43_000855 1025.77