Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00069 ATGGCTAATCATTCTTACAATGGGTCATTCTCTTTTGGAGGATCACGACATGGTCAGGGACAAGAGATTGTGCCATTTTCGACCAACCAGGATTCCTTACGAGTTTTCCTGCTACATGGAAACTTGGATATCTGCGTTAAGGAGGCCAAAAACCTTCCTAACCTGGACCAGATTCATAGTACCTTTGGGGGAGTTTTCGGCTCAATGTTCTCAAAAAAGAAGTCAGAAGACAAGAATACCAGTGATCCATATGTCACCGTGTCAATAGCTGGTGCTGTTATTGGCAGGACATTTGTGATGAACGACAATGAGAGCCCAGTTTGGATGCAGCATTTTAATGTTCCTGTTGCACACCGTGCTTCAGAAGTCCACTTCATTGTCAAAGACAATGATGTTGTTGGATCAGAGATCATGGGTGCTGTTGGAATCCCAGTGGAGCAGTTGTACAATGGAGACAAAGTTGAGGGGATATATCCAATTCTGAACTCAAGTGGCAAGCCCTGCAATCGCAGAGCTGTGCTGAGTTTATCTATTCAATACACCCCATGTGAGGAAGTACCCCTTTACCATCATGGAATAGGAGCAGGCCCCCACTATCAAGGAGTTCCTGGTACTTATTTTCCTTTAAGGAAAGGTGGGAAAGTTACTCTGTATCAAGATGCTCACGTTCAAGAGGGCTTGCTTCCAAATTTGAAGATCGACGGCAATGTTGATTATGAGCATAGAGATTGTTGGCTTGACATATATAATGCATTATGTCAGGCCCGTCGTTTGATTTACATTACAGGATGGTCCGTGTACCACAATGTTGTGCTGGTCCGCGATGGTCACGATGGTACAGATCGAATGTTAGGTGATCTTTTAAAACAGAAGTCCCAGGAAGGTGTCAGAGTTCTACTCCTTATATGGGACGATCCAACGTCTAGAAGTGTCTTAGGATACAAAACAGAGGGGCTTATGGCAACCAACGATGAGCAGACAAGACGTTTCTTCAAGCATTCTTCTGTACAGGTGCTGTTGTGCCCTCGATCAGCAGGAAAAAAACACAGCTGGGCCAAGAAGCAGGAAGTAGGAACTATCTATACTCATCATCAGAAAACCGTTATTGTGGATGCTGATGCTGGTCAAAATCGAAGAAAGATAGTTGCTTTTGTTGGAGGTCTGGATTTATGCTTGGGCCGATATGACACACAAGACCACCCTCTTTTCAAGACTTTACCGACAATTCACAAAGATGATTATCATAATCCTAACTTTGCGGAGCATACAGATGGCTGTCCGAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGACGGTCCAGCAGCCTATGATGTCCTCATAAATTTTGAAGAGCGCTGGTTAAGGGCATCCAAGATGCATAGACTGCAAAAGCTGAAGTCTTCTTATGATGATTCTTTGCTCAAGCTAGAAAGAATTGATGACATTGTCGGTGTCCACGATGTTAGCTCCTCTGACAATGATGACCCTGAGGGTTGGCATGTTCAGGTATTCCGTTCAATCGATTCTGCTTCTGTGAAAGGATTTCCAAAAGATCCGAAAGATGCTACTAGAAGGAACTTGGTATGTGGGAAGAATGTCCTCATAGATATGAGCATACATACAGCATATGTCAACGCAATTCGAGCAGCTAAAGACTTCATATATATTGAGAACCAATACTTTCTTGGTTCATCATATAACTGGGATTCTTATAAAGATTTGGGTGCAAACAACTTAATACCAATGGAAATTGCTCTGAAAATTGCAAATAAAATTAGAGCAAACGAGAGATTTTCTGCATACATCGTCGTTCCAATGTGGCCTGAAGGAATACCTACAAGTAAACCAACTCAGCGGATACTCTTTTGGCAATATAACACAATGCAAATGATGTATGACACAATCTACAAGGCTCTGGAAGAGGTGGGTCTTCAGTACACGTACGAACCACAGGATTATCTGAATTTCTTTTGTCTTGGTAATCGTGAGGCAATATCTAGTGCGGACAATTTGCCATCAGGACACAGCCCTCAATCACTCACTCAGAGAAACAGGCGGTTTATGATATATGTACATTCGAAAGGAATGATAGTGGATGATGAATATGTGATACTGGGGTCTGCAAATATCAACCAGCGATCCATGGAAGGCACTAGAGACACTGAAATTGCAATGGGTGCATATCAGCCGCATCATACTTGGTCTCACAAGCAATCTAAACCTCGTGGACAGGTCTATGGATATAGAATGTCCCTGTGGGGTGAACACATTGGAGATGTGGAAGAATGCTTCGAGCGACCAGAAAGTCTTGAATGTATCAGAAGGGTGAGATGCTTGAGTGAGATGAACTGGAAACAGTATGTGTCTGATGATGTGACAGAGATGAGAGGCCATTTGATCAAGTATCCTCTACATGTTGATGTCACGGGGAAGGTGAGCCCAATTCCTGGCTGTGAGCAATTTCCTGATATGGGTGGAAATGTAAAAGGGACCTATGTCACCATTCAAGAAAATCTTACCATCTAA 2529 0.4302 MANHSYNGSFSFGGSRHGQGQEIVPFSTNQDSLRVFLLHGNLDICVKEAKNLPNLDQIHSTFGGVFGSMFSKKKSEDKNTSDPYVTVSIAGAVIGRTFVMNDNESPVWMQHFNVPVAHRASEVHFIVKDNDVVGSEIMGAVGIPVEQLYNGDKVEGIYPILNSSGKPCNRRAVLSLSIQYTPCEEVPLYHHGIGAGPHYQGVPGTYFPLRKGGKVTLYQDAHVQEGLLPNLKIDGNVDYEHRDCWLDIYNALCQARRLIYITGWSVYHNVVLVRDGHDGTDRMLGDLLKQKSQEGVRVLLLIWDDPTSRSVLGYKTEGLMATNDEQTRRFFKHSSVQVLLCPRSAGKKHSWAKKQEVGTIYTHHQKTVIVDADAGQNRRKIVAFVGGLDLCLGRYDTQDHPLFKTLPTIHKDDYHNPNFAEHTDGCPREPWHDLHSKIDGPAAYDVLINFEERWLRASKMHRLQKLKSSYDDSLLKLERIDDIVGVHDVSSSDNDDPEGWHVQVFRSIDSASVKGFPKDPKDATRRNLVCGKNVLIDMSIHTAYVNAIRAAKDFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIANKIRANERFSAYIVVPMWPEGIPTSKPTQRILFWQYNTMQMMYDTIYKALEEVGLQYTYEPQDYLNFFCLGNREAISSADNLPSGHSPQSLTQRNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWSHKQSKPRGQVYGYRMSLWGEHIGDVEECFERPESLECIRRVRCLSEMNWKQYVSDDVTEMRGHLIKYPLHVDVTGKVSPIPGCEQFPDMGGNVKGTYVTIQENLTI* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00069 842 Gene3D Endonuclease Chain A 232 477 - -
Pte12g00069 842 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 394 IPR001736 GO:0003824
Pte12g00069 842 PANTHER PHOSPHOLIPASE D 32 832 IPR015679 -
Pte12g00069 842 ProSiteProfiles C2 domain profile. 18 158 IPR000008 -
Pte12g00069 842 FunFam Phospholipase D delta 235 473 - -
Pte12g00069 842 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 688 715 IPR001736 GO:0003824
Pte12g00069 842 Pfam C2 domain 40 160 IPR000008 -
Pte12g00069 842 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 183 IPR035892 -
Pte12g00069 842 CDD C2_plant_PLD 35 181 - -
Pte12g00069 842 PIRSF PLD_plant 27 842 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte12g00069 842 SMART C2_3c 41 157 IPR000008 -
Pte12g00069 842 SUPERFAMILY Phospholipase D/nuclease 199 460 - -
Pte12g00069 842 Gene3D C2 domain 36 171 IPR035892 -
Pte12g00069 842 Gene3D Endonuclease Chain A 493 741 - -
Pte12g00069 842 SMART pld_4 688 715 IPR001736 GO:0003824
Pte12g00069 842 SMART pld_4 359 394 IPR001736 GO:0003824
Pte12g00069 842 FunFam Phospholipase D 507 734 - -
Pte12g00069 842 Pfam Phospholipase D C terminal 762 832 IPR024632 -
Pte12g00069 842 Pfam Phospholipase D Active site motif 360 394 IPR001736 GO:0003824
Pte12g00069 842 Pfam Phospholipase D Active site motif 689 715 IPR001736 GO:0003824
Pte12g00069 842 SUPERFAMILY Phospholipase D/nuclease 528 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00069 Pte-Chr12 626774 630570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00069 30 843 Phospholipase D Gene Family (Wang group) AT2G42010 67.807 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00069 K01115 - qsa:O6P43_034183 1311.98