Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00057 ATGTCTTCTAATCTTTCTGTCTTTGATGGTTCATTCCTCAGGCATTTAAGCTCCGACATCTTCTCCTCTGATGGAGGAACTGAGTCAACTGACCTTTTGTGTTTCTCTGATGCTGACCCTTTCACTCTCTTTTCGGACCCACCAGTTGATGTCTTTCTTCAAAATTCCAACACCCAAAACCAGCAATACCCATTTGATGAATCCTCTGCCCTCCTTTCTTCTCCTCCTCCAAGTAATCAAAAGGAAAACCTGAGCCTCCCCCATGTTCAGCCTCCGTCAGATGGTCTAAATTTAGAGAGTGTATTTGCAGATTTTTCAATCTTGGAAGGTATGGAATTAAAGACCGAGGAATGCGAAATGGGGTTTGATCACACATGCAATCCGCCCCTGGTTCCTCACAGTTACAGTAGCCTTCGGAATTCAACAAAATATATGCCAAGGAGCTTCAGCAGTAACTCTTTCGATGCCGAGCCTTGCCTTATCTTTCAACCAAGCTTTTCCAGTAATTTTATGGATTCTAACGACACCCAAAATCTCAGTTCTCCTGATAATAGTTTTTTCACCGGCCAAATAAGAAGGGTCTGCAGCACCGGCGACTTGCAGAATCCCAAACCAGTTCATGTTATATGTAGTTCTTTCTCAAACCCTTTTGCTTCAGATGTCTCGTCATTCGAGGAAGCCAGTTTTAAAGTGGGGCGTTACACTGCAGAAGAGAGAAAAGAGAGGATTTCCAAGTACAGAGCCAAGAGAACACAGAGGAACTTCAACAAGACCATTAAGTATGCATGTCGAAAAACACTAGCCGACAATCGACTTCGTATACGTGGCAGATTCGCACGCAATGACGAAATCAGCGACGTCCAGAAAGCGCCATGTTCAACCAGAGAAGAAGACGAAGATGAGCTTTGGTTCGATGGGCTGCAAGGAGAACAAAACTTGGGAAGTGTAGGAGGACGGCAATACTATAATATGAAAGAGTTCAGTGGGACCCACTTGCAATACTAA 1005 0.4408 MSSNLSVFDGSFLRHLSSDIFSSDGGTESTDLLCFSDADPFTLFSDPPVDVFLQNSNTQNQQYPFDESSALLSSPPPSNQKENLSLPHVQPPSDGLNLESVFADFSILEGMELKTEECEMGFDHTCNPPLVPHSYSSLRNSTKYMPRSFSSNSFDAEPCLIFQPSFSSNFMDSNDTQNLSSPDNSFFTGQIRRVCSTGDLQNPKPVHVICSSFSNPFASDVSSFEEASFKVGRYTAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRLRIRGRFARNDEISDVQKAPCSTREEDEDELWFDGLQGEQNLGSVGGRQYYNMKEFSGTHLQY* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00057 334 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 49 295 IPR045281 GO:0009909
Pte12g00057 334 MobiDBLite consensus disorder prediction 67 90 - -
Pte12g00057 334 MobiDBLite consensus disorder prediction 67 87 - -
Pte12g00057 334 Pfam CCT motif 239 281 IPR010402 GO:0005515
Pte12g00057 334 ProSiteProfiles CCT domain profile. 239 281 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00057 Pte-Chr12 541828 543600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00057 235 286 C2C2-CO-like Transcription Factor Family AT5G24930 48.077 1.23e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte12g00057 CCT 8.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00057 - - qsa:O6P43_024154 353.214