Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte12g00055 | ATGGGTTTTCCGGTAGGCTGCACGGAGGTAATTCTCCCAAAGCTCTGCGTCCATGCTCTTTGGGTTCTGGGTTTCATCAGAAAATTGATCTCTGTCTTCTTTCGTTATCTGGGTTTCCAAGATTTTATAGAACCAGACGTTGTATGGTCGGATCAACAGACCCGAATGCCCGAATTCCGGTCCGTTTCCGCCCTCCTGATCTGCGAACTCCTGTCCGTCGTGAAATTTTCTGAGCTAGTGGACCCACCTGAGAGCTGTGCCGTTTGCCTCTACGAATTTGAAGCTGATGACGAGATAAGACAGCTGACGAACTGCCGTCATATCTTCCATCGGCACTGCCTGGACCGTTGGATGGGTTACGATCAAAGAACGTGTCCTCTTTGCAGGACCTCATTCATACCTGAAGATATGCAAGGAAATTTCAACGAGAGGCTCTGGGAAGCCTCTGGTATCCCTGACCTTTATGCAGAATTTTCTCACATCACAAATGGCTTTTAG | 498 | 0.4839 | MGFPVGCTEVILPKLCVHALWVLGFIRKLISVFFRYLGFQDFIEPDVVWSDQQTRMPEFRSVSALLICELLSVVKFSELVDPPESCAVCLYEFEADDEIRQLTNCRHIFHRHCLDRWMGYDQRTCPLCRTSFIPEDMQGNFNERLWEASGIPDLYAEFSHITNGF* | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte12g00055 | 165 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 132 | IPR013083 | - | |
Pte12g00055 | 165 | ProSiteProfiles | Zinc finger RING-type profile. | 86 | 129 | IPR001841 | - | |
Pte12g00055 | 165 | SMART | ring_2 | 86 | 128 | IPR001841 | - | |
Pte12g00055 | 165 | CDD | RING-H2_RHA1-like | 86 | 132 | - | - | |
Pte12g00055 | 165 | SUPERFAMILY | RING/U-box | 68 | 135 | - | - | |
Pte12g00055 | 165 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 24 | 141 | - | - | |
Pte12g00055 | 165 | Pfam | Ring finger domain | 85 | 129 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte12g00055 | Pte-Chr12 | 532519 | 534662 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte12g00055 | 1 | 150 | C3H Transcription Factor Family | AT1G63840 | 56.774 | 2.15e-55 | 170 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte12g00055 | K16281 | - | zju:107430201 | 267.314 |