Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00049 ATGTCTACTAAAGAATTTCATTCAAGCTCTTCTACTTCAACTGATGGTGGTAAAATCAAAAGGTTGCTCACTCATGGAGGTCGATATGTACAGTACAACGTGTACGGAACCTTATTTGAGGTCTCCTCCAAGTACGTGCCACCCATTCGTCCTATTGGCAGAGGTGCTTATGGACTTGTCTGCGCGGCTGTGAATTCAGAGACGCGTGAGGAAGTTGCCATCAAGAAGATCGGAAATGCATTTGACAACAAAATAGATGCCAAAAGGACTTTGCGAGAAATTAAGCTTCTTCGTCACATGGACCATGAGAACGTTATTGCTATCAAAGACATTATAAGGCCACCAAAAAGGGAGAGTTTCAACGACGTTTATATTGTTTATGAATTGATGGATACAGATCTTCATCATATAATCCGTTCTGAGCAATCTCTCACAGATGACCACTGTCAGTACTTTCTATATCAACTATTACGAGGTTTGAAATATGTGCACTCTGCCAATGTCTTGCACCGTGATCTTAAGCCGAGCAATTTGCTTGTCAATGCAAATTGTGACCTGAAAATTGCAGACTTTGGATTGGCTAGGACGACGTCGGAGACAGATTTCATGACTGAGTATGTTGTCACTCGTTGGTATCGAGCTCCAGAACTGCTCCTTAATTGTTCAGAATATACAGCAGCAATAGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACAAGAGAACCTCTATTTCCTGGAAAGGATTATGTTCATCAGCTAAGACTCATAACAGAGTTAATTGGTTCGCCCGACGACACTAGCCTTCGATTTCTGCGAAGCGAGAATGCCAGGAGATATGTTAGACAGCTTCCTCAGTACAAGAAGCAAAGGTTCTCTGCTAAGTTCCCTAACATGTCCCCTGAGGCTTCAGACCTGCTGGAGAAAATGCTAGTGTTTGATCCCAATAAGCGCATAACAGTTGAAGAGGCACTCTGTCACCCATATCTTTCAACACTTCATGATACTAATGATGAGCCTATCTGTCCTAAGCCATTCGGTTTTGACTTTGAACATCCGTCATGCACTGAGGAACATATCAAAGAACTCATTTGGAATGAATCTGTGAACTTCAATCCAGATCCAATTAGTTAG 1140 0.4184 MSTKEFHSSSSTSTDGGKIKRLLTHGGRYVQYNVYGTLFEVSSKYVPPIRPIGRGAYGLVCAAVNSETREEVAIKKIGNAFDNKIDAKRTLREIKLLRHMDHENVIAIKDIIRPPKRESFNDVYIVYELMDTDLHHIIRSEQSLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLVNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDTSLRFLRSENARRYVRQLPQYKKQRFSAKFPNMSPEASDLLEKMLVFDPNKRITVEEALCHPYLSTLHDTNDEPICPKPFGFDFEHPSCTEEHIKELIWNESVNFNPDPIS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00049 379 Gene3D Phosphorylase Kinase; domain 1 29 369 - -
Pte12g00049 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Pte12g00049 379 Gene3D Transferase(Phosphotransferase) domain 1 130 359 - -
Pte12g00049 379 FunFam Mitogen-activated protein kinase 31 141 - -
Pte12g00049 379 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00049 379 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte12g00049 379 FunFam Mitogen-activated protein kinase 130 359 - -
Pte12g00049 379 SMART serkin_6 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00049 379 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00049 379 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Pte12g00049 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 44 334 - -
Pte12g00049 379 CDD STKc_TEY_MAPK 39 375 - -
Pte12g00049 379 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00049 Pte-Chr12 490038 493347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00049 8 375 MAP Kinase Gene Family AT4G01370 81.793 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte12g00049 Pkinase 3.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00049 - - rcu:8287426 683.33