Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00036 ATGGGCAACTGCAATGGCCTTCCCTCCTCCTATCACGACAGAACCCAAGTCAACACCGCCGCCGCCGAAACTACCGGTCGAGCCCATCGTTCTTCTAATGGCATCACCGTTCTCCCTTCCGATTCGGAGCCATCTCATTCTCAGTCGCACTGGCACTCAACAGTTCCCCCACCAAAACAACCAATAACTTCTTCAGCCTCCACTGTTGGCCGGGTCCTAGGCCGCCCCATGGAGGACGTAAGGTTATCCTACATATTTGGCCGTGAACTCGGGCGTGGCCAGTTCGGTATTACCTACTTGGTTACTCACAAGGTGACTAAACAACAGTTTGCCTGCAAATCTATAGCCACTCGCAAACTCATCAATCGCGATGATATCGAAGACGTTCGCCGTGAGGTCCAGATTATGCACCACCTCACCGGCCACCGTAACATCGTCGAGCTGAAAGGTGCTTACGAAGACCGTCACTCGGTCAATTTGGTCATGGAGCTCTGTTCCGGCGGCGAACTCTTTGACCGGATCATCGCCAAAGGTCATTATTCCGAACGTGCCGCAGCACATCTTTGCCGCCAGATCGTGGCGGTGGTCCATAATTGTTATACCATGGGTGTGATGCACAGGGATTTGAAGCCCGAAAACTTCCTTTTCCTCAGTGAAGATGAAAACTCTCCCTTGAAGGCTACGGATTTTGGTCTCTCTGTGTTCTTTAAGCAAGGAGACGTGTTTAAAGATCTTGTTGGAAGTGCCTACTATGTTGCTCCTGAAGTTTTGCGAAGAAGTTATGGTGCTGAAGCTGATATTTGGAGTGCTGGAGTCATCCTCTACATTCTACTTAGTGGAGTCCCACCTTTCTGGGCTGAAAATGAACAGGGTATATTTGATGCCATTCTACGTGGCCACATTGATTTTTATTCTGATCCATGGCCTTCTGTATCGAAGAGTGCAAAAGATCTTGTGAAGAAGATGTTGCGAGCAGACCCTAAAGAACGACTGTCTGCAGCTGAGGTCCTTAATCACCCTTGGATGAGAGAGGATGGAGATGCATCTGACAAGCCTCTTGATATTGCTGTTTTAACTAGAATGAAACAATTCCGTGCAATGAACAAACTCAAGAAAGTAGCTCTAAAGGTGATTGCCGAAAATCTTTCTGAAGAAGAAATTATTGGTCTGAAGGAGATGTTTAAATCCATGGACACAGATAACAGCGGAACAATCACATTTGAGGAGCTAAAAGCTGGCCTTCCTAAACTGGGTACTAAGCTTTCTGAGTCTGAAGTGAGGCAGTTGATGGAGGCGGCAGATGTGGATGGCAATGGAGCTATTGATTACCTAGAGTTTATAACAGCCACTATGCACATGAACCGAATGGAAAAAGAAGATCACTTATATAAAGCCTTTGAATATTTTGACAAGGATAAGAGCGGGTACATTACAAAGGAAGAACTGGAATCCGCCCTTAAGAAATATAACATGGGCGATGAGAAAACAATAAAGGAGATCATTGCGGAAGTTGACACGGATAACGATGGAAGAATTAACTATGAAGAGTTTGCAGCTATGATGAGGAAAGGAAATCCTGATCTAGTTCCTAATAGAAGACGCAAATAA 1608 0.4596 MGNCNGLPSSYHDRTQVNTAAAETTGRAHRSSNGITVLPSDSEPSHSQSHWHSTVPPPKQPITSSASTVGRVLGRPMEDVRLSYIFGRELGRGQFGITYLVTHKVTKQQFACKSIATRKLINRDDIEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCSGGELFDRIIAKGHYSERAAAHLCRQIVAVVHNCYTMGVMHRDLKPENFLFLSEDENSPLKATDFGLSVFFKQGDVFKDLVGSAYYVAPEVLRRSYGAEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFYSDPWPSVSKSAKDLVKKMLRADPKERLSAAEVLNHPWMREDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGAIDYLEFITATMHMNRMEKEDHLYKAFEYFDKDKSGYITKEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYEEFAAMMRKGNPDLVPNRRRK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00036 535 FunFam Calcium-dependent protein kinase 1 86 169 - -
Pte12g00036 535 ProSiteProfiles EF-hand calcium-binding domain profile. 385 420 IPR002048 GO:0005509
Pte12g00036 535 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Pte12g00036 535 SMART serkin_6 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00036 535 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Pte12g00036 535 Gene3D Phosphorylase Kinase; domain 1 86 169 - -
Pte12g00036 535 ProSiteProfiles EF-hand calcium-binding domain profile. 493 527 IPR002048 GO:0005509
Pte12g00036 535 MobiDBLite consensus disorder prediction 19 70 - -
Pte12g00036 535 SUPERFAMILY Protein kinase-like (PK-like) 83 351 IPR011009 -
Pte12g00036 535 Gene3D - 351 525 - -
Pte12g00036 535 SMART efh_1 461 489 IPR002048 GO:0005509
Pte12g00036 535 SMART efh_1 425 453 IPR002048 GO:0005509
Pte12g00036 535 SMART efh_1 496 524 IPR002048 GO:0005509
Pte12g00036 535 SMART efh_1 389 417 IPR002048 GO:0005509
Pte12g00036 535 FunFam Calcium-dependent protein kinase 1 350 525 - -
Pte12g00036 535 SUPERFAMILY EF-hand 381 522 IPR011992 -
Pte12g00036 535 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Pte12g00036 535 FunFam calcium-dependent protein kinase 1 170 349 - -
Pte12g00036 535 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Pte12g00036 535 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Pte12g00036 535 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Pte12g00036 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 517 - -
Pte12g00036 535 Pfam Protein kinase domain 86 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00036 535 CDD STKc_CAMK 84 341 - -
Pte12g00036 535 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Pte12g00036 535 Gene3D Transferase(Phosphotransferase) domain 1 170 350 - -
Pte12g00036 535 ProSiteProfiles Protein kinase domain profile. 84 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00036 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pte12g00036 535 Pfam EF-hand domain pair 460 522 IPR002048 GO:0005509
Pte12g00036 535 Pfam EF-hand domain pair 390 450 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00036 Pte-Chr12 409538 413039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00036 70 534 EF-hand Containing Proteins AT4G23650 81.935 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte12g00036 Pkinase 4.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00036 K13412 - qsa:O6P43_034294 910.598