Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00031 ATGGACTTCGTGCGCTATTTACTGTGGATTTGCATTGTGGGTTTGGTTTACTGGCAAGTGAATGCGGACCCAGTTGAAGATAAGAAAGCTCTGCTTGACTTTGTCAACAATCTTCATCATTCTCGCCCACTAAATTGGAATTGGAATTGGAACTCTGATGTGTGCAATGTTTGGATTGGTGTCACTTGTAATGAGGATGGGTCTAGAGTGGTGGCTGTCAGACTACCTGGAGTTGGGCTTCAGGGTCCTATTCCACCAAACACACTCGGTCGTCTTTCAGCTCTTCAAGCATTGAGTCTCAGATCCAATGATATAACTGGGGATTTTCCTGCTGACTTGCTTAATCTAAAAAACTTGTCTCTACTCTATCTTCAGTTCAACAACTTCTCGGGTCCTTTGCCGTCTGATTTCACCGTCTGGAAGAATCTCACTGTTATTAATTTGTCTAACAATCGTTTCAGTGGAAGCATTCCTCAGTCGCTGCCTCACTTGACTGAGCTTACTACTTTGAATCTCGCAAACAATTTGCTTTCTGGTGAAATCCCTGATCTCGAGTTTCCTAGATTGCAACACTTGAATTTGTCGAGCAATAATTTGAGTGGCAGTGTGTCTCAATCACTCCTTAAATTTCCAAGGTCAGCATTCACCGGCAACAACGTTACTTTTGAGAGTGCTCCTCAGCTTTTCCCTGCTGTTGCACCCTCCTCTTCTGTACCACGTTCAAAATCTAAGAACACGAGAAGAATGGGTCTAGTGGCATTGCTGGTAATTATAGGTGCAATTATTCTGTGTGTTGCAGTGATTGCCTTTATGATGTATGTTTGCTGCTCAAAAAGTAAGAGTAGAGATGGATTTTCTGGAACCCTGCAGAAGGGACAAATGTCACCAGAGAAAGTAGTGTCGAGGAGTCAAGATGCAAATAATAAATTGGTTTTCTTTGGGGGATGCAGTTATGCATTTGATTTGGAGGATTTGCTGAGGGCTTCCGCTGAAGTAGTGGGTAAGGGAACATTTGGTATGGCATACAAGGCTATACTGGAGGATGCTGCTACTGTGGTTGTGAAGAGGCTCAAAGAGGTGGCCGTGGGAAAGAAGGATTTTGAGCAACACATGGAGATTATTGGAAATATTAAACATGAGAACGTAGTTGAACTAAAGGCATATTACTATTCTAAAGATGAGAAGCTGATGGTCTATGATTACCACGCCCAGGGAAGTTTGTCTTCTATCTTACATGGTAAAAGAGAAGATAGGGTCCCATTAGACTGGGATTTGCGGCTTAGAATAGCCCTAGGTGCTGCCAGAGGCATTGCTTGCATTCATGCTGCGCATGGTGGGAAGCTTGTACATGGCAACATCAAATCGTCAAATATCTTTCTCAACTCCCAGCAGTTTGGTTGTGTATCTGACCTTGGTTTGGCAAATATAATGTGCTCACTGGCTCCGCCAATCTCCAGAGCCGCAGGATACCGAGCCCCAGAAGTGATGGACACTAGGAAAGCAGCACAACCATCTGACGTATATAGTTTTGGTGTAGTGTTACTTGAGCTTCTGACAGGAAAATCACCCATTCACACCATTGGCGGTGATGAGATTATCCACTTGGTGAGGTGGGTTCATTCAGTTGTGCGAGAGGAGTGGACAGCTGAAGTTTTTGATTTGGAGCTGATGAGATATCCAAACATAGAGGAAGAGATGGTAGAGATGTTGCAGATTGCTATGTCATGCGTTGCAAGGGTTGCTTCTCAGAGGCCTAAAATGTCAGAAGTAGTCAAAATGATAGAAAACGTCAGATCCATTGAAGAGAACCGCGGATATATGGAGAACCAATCTGGAAGTTTGACCCCATCAGCGTTGAGAACTGAGACAGAGAATCAATTCCATTGA 1887 0.4377 MDFVRYLLWICIVGLVYWQVNADPVEDKKALLDFVNNLHHSRPLNWNWNWNSDVCNVWIGVTCNEDGSRVVAVRLPGVGLQGPIPPNTLGRLSALQALSLRSNDITGDFPADLLNLKNLSLLYLQFNNFSGPLPSDFTVWKNLTVINLSNNRFSGSIPQSLPHLTELTTLNLANNLLSGEIPDLEFPRLQHLNLSSNNLSGSVSQSLLKFPRSAFTGNNVTFESAPQLFPAVAPSSSVPRSKSKNTRRMGLVALLVIIGAIILCVAVIAFMMYVCCSKSKSRDGFSGTLQKGQMSPEKVVSRSQDANNKLVFFGGCSYAFDLEDLLRASAEVVGKGTFGMAYKAILEDAATVVVKRLKEVAVGKKDFEQHMEIIGNIKHENVVELKAYYYSKDEKLMVYDYHAQGSLSSILHGKREDRVPLDWDLRLRIALGAARGIACIHAAHGGKLVHGNIKSSNIFLNSQQFGCVSDLGLANIMCSLAPPISRAAGYRAPEVMDTRKAAQPSDVYSFGVVLLELLTGKSPIHTIGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVARVASQRPKMSEVVKMIENVRSIEENRGYMENQSGSLTPSALRTETENQFH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00031 628 Gene3D Transferase(Phosphotransferase) domain 1 403 615 - -
Pte12g00031 628 ProSiteProfiles Protein kinase domain profile. 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte12g00031 628 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Pte12g00031 628 SUPERFAMILY L domain-like 26 209 - -
Pte12g00031 628 Gene3D Phosphorylase Kinase; domain 1 291 401 - -
Pte12g00031 628 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Pte12g00031 628 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Pte12g00031 628 PANTHER OS05G0588300 PROTEIN 7 604 - -
Pte12g00031 628 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pte12g00031 628 FunFam pollen receptor-like kinase 1 296 401 - -
Pte12g00031 628 Pfam Protein tyrosine and serine/threonine kinase 331 593 IPR001245 GO:0004672|GO:0006468
Pte12g00031 628 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Pte12g00031 628 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 402 608 - -
Pte12g00031 628 SUPERFAMILY Protein kinase-like (PK-like) 331 594 IPR011009 -
Pte12g00031 628 MobiDBLite consensus disorder prediction 605 628 - -
Pte12g00031 628 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Pte12g00031 628 Gene3D Ribonuclease Inhibitor 26 139 IPR032675 -
Pte12g00031 628 FunFam Probable inactive receptor kinase RLK902 24 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00031 Pte-Chr12 351993 355339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00031 16 597 Receptor kinase-like Gene Family AT4G23740 63.805 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte12g00031 Pkinase 3.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00031 - - qsa:O6P43_024006 857.44