Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00028 ATGGACACAGTAATCTCCAGTCAGGTTCACATTGTTACCTGGAATCTCCCAACTACACCTAACTTCTACGAGGATTGGGCCAAGCAAAGAAACTTTTCTGTTGGTGATAAGATGGTTTTCAATTACCTTCCAGGATTAAGCAACTTGGTCCACGTTCCCAAGAGTGACTTTGATCGATGTACCATAAGAAATGTGATTCACACATATTTTCAAGGTCATGATACTATCCTCCTAGATAGGCCAGGTGATTACTACTTTTTCAACTCCGTTGGGAAGCACTGCGAGCTTGGCCAGAAACTTCATGTTTTAGTACAATGA 318 0.4151 MDTVISSQVHIVTWNLPTTPNFYEDWAKQRNFSVGDKMVFNYLPGLSNLVHVPKSDFDRCTIRNVIHTYFQGHDTILLDRPGDYYFFNSVGKHCELGQKLHVLVQ* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00028 105 PANTHER BLUE COPPER PROTEIN 13 103 IPR039391 GO:0009055
Pte12g00028 105 Pfam Plastocyanin-like domain 14 98 IPR003245 GO:0009055
Pte12g00028 105 Gene3D - 10 105 IPR008972 -
Pte12g00028 105 ProSiteProfiles Phytocyanin domain profile. 8 105 IPR003245 GO:0009055
Pte12g00028 105 FunFam Cupredoxin superfamily protein 8 105 - -
Pte12g00028 105 SUPERFAMILY Cupredoxins 13 104 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00028 Pte-Chr12 339810 340382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00028 14 104 Phytocyanin Superfamily AT2G25060 34.783 2.44e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00028 - - gmx:102660389 135.191