Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00005 ATGACCAGACTCGCATGCTGCTGCTGCTACTTTCTTGTATTGGCTTCGGCTTCTCTCTTGCTCAAAACCAATGTGTCGTGCTATCAGTATAAGGTCGGGGATATGGATTCTTGGGGAATACCAACTTCAGCAAACCCGGGACTGTATACCACATGGTCCAAGCATCATAGTCCCAGGATTGGCGACTCCCTCTTCTTTTTCTACCCACCTAGTCAAGATTCGCTGATTCAAGTGACAAAGCAATCCTACGACAGTTGCAACCTGAAAAATCCAATTCTGTACATGGATGACGGAAACTCACTGTTCAACATAACGTCCTACGGGGATTTTTACTTCACAAGCGGAGTGGCCGGACATTGTGAAAAGAATCAGAAACTCCACGTGAGAGTGCTCTCCGCCTCTGGGAATGGCCTAGCAAGTGCTCCTGTTCCTACAGCATTGCCGGATTATGCACCTTCCTATCCCACTGTCTTTGGGACAATACCCGTTTCTGAGTCGTCCTCTAATATCTCACCGTCCCCACTTGTTGTGTCTACCATCCTTGCAGGTTTGGTATTATGTGGCCAACTCCACCGTCTGATCTGA 585 0.4803 MTRLACCCCYFLVLASASLLLKTNVSCYQYKVGDMDSWGIPTSANPGLYTTWSKHHSPRIGDSLFFFYPPSQDSLIQVTKQSYDSCNLKNPILYMDDGNSLFNITSYGDFYFTSGVAGHCEKNQKLHVRVLSASGNGLASAPVPTALPDYAPSYPTVFGTIPVSESSSNISPSPLVVSTILAGLVLCGQLHRLI* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00005 194 SUPERFAMILY Cupredoxins 27 131 IPR008972 -
Pte12g00005 194 CDD OsENODL1_like 28 131 IPR041846 -
Pte12g00005 194 PANTHER BLUE COPPER PROTEIN 27 145 IPR039391 GO:0009055
Pte12g00005 194 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Pte12g00005 194 Gene3D - 28 141 IPR008972 -
Pte12g00005 194 FunFam Early nodulin-like protein 1 27 135 - -
Pte12g00005 194 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00005 Pte-Chr12 100639 101778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00005 24 163 Phytocyanin Superfamily AT1G64640 56.429 2.41e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00005 - - qsa:O6P43_034378 230.335