Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01715 ATGTTTTCGACCATGGATTCTGCGAGAGATGACGGTGCTGTGGCTGGTACGGTTCTAATACCAACGCGATTTGTATGGCCATACGGAGGAAGAAGTGTATATATTAGTGGATCTTTCACACGGTGGTCCGAGCTTCTTCCAATGTCCCCAGTAGAGGGTTGCCCAATTGTATTCCAAGTTATATATAGCTTGGCGCCAGGACCGCACCAGTACAAGTTTTTTGTTGATGGAGAATGGCGTCATGATGAGCATCAATCTTATGTACAAGGGGAGTATGGGGTAGTTAATACTCTCTACTTAGCTGCTGATCCCAACTTTATCCCAGTTGTTCAAGATATAGCTTCTGGTTCTAACATGGATGTCGATAATGAGACATTTTGGCGTGTGGTCCGGCTGACAGATGGTATGTTGACTGAAGTGCCTCCTAGATTATCGGACACTGACCTACAGACCTCCCGGCAACGTATTTTGGCATTCCTGTCTTCTCACAATGCCTATGAGTTACTGCCGGAGTCAGGGAAGGTTGTGGCCTTGGATATCGATTTGCCTGTGAAGCAGGCATTTCATATATTGCATGAGCAGGGAATTCCCATGGCTCCTCTCTGGGACTTCTGCAAAGGTCAGTTTGTTGGAGTTCTCAGTGCACTGGATTTTATCTTAATTCTCAGAGAGCTTGGGAATCATGGATCAAATCTTACTGAAGAAGAGTTGGAAACACACACGATATCTGCTTGGAAGGATGGAAAGTCATATCTGAATAGACAAAATGGACATGACAGAGCAGCATCAAGACTTCTCACCCATGCAGGACCGAATGATAATTTGAAAGATATTGCATTGAAGATCTTGGAGAATGAGGTTTCAACCGTACCTATCATCCATTCTTCATCTGAAGATGGTTCATACCCACAATTATTACACCTTGCTTCACTTTCTGGAATACTGAAGTGTATATGCCGGTATTTCAGACATTGTCCTGGATCGTTGCCCGTACTTCAGCTTCCAATAAGTGCAATTCCTTTGGGTACATGGGTCCCCAAAATCAGTGACTCAAATCGGCGGCCCTTAGCCATGCTGAGACCAAATGCTTCTGTTAGTTCAGCCCTCAATTTATTAGTTCAAGCCCAAGTGAGCTCAGTTCCAATAGTTGATGATAATGACTCATTAATTGACATTTATTGTCGCAGTGATATTACAGCTCTGGCCAAGGACAGAGTTTACACGCATATTAATCTTGATGAAATGACCATACATCAGGCATTACAGTTGGGTCAAGACTCATATTCTCCTTATGAGCTGAGAAGTCAAAGATGTCAAATGTGCTTGCGTTCTGATTCACTGCACAAAGTGATGGAACGTTTGGCAACTCCTGGTGTCCGACGGCTTGTCATTGTGGAAGCAGGCAGTAAGCGTGTAGAAGGGATTGTTTCAGTGAGCGACGTTTTCAAGTTCTTCGTTGATATAATCAACAGAAGAAGCAGAAGAAAGAAACTCGACCAGGGGTTTCAAACTAAACTGATTGACAACCAAGGGATGAGGGGTTTCCCACCTCAACAGGAAGAGAATGAGGTAGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTATGGAGGTTTAGTGAGCACCATGCCGAATTTCTCTACCATTTTCTTCTTCTTCACTTTGGCCAATATGAGTTTACCTGGTACTAGCAGCTTTATCGGGGAATTTCTCATCTTAGTAGGAGCTTTCCAAAGAAATAGCTTAGTTGGCAATTCAAATTGA 1770 0.4333 MFSTMDSARDDGAVAGTVLIPTRFVWPYGGRSVYISGSFTRWSELLPMSPVEGCPIVFQVIYSLAPGPHQYKFFVDGEWRHDEHQSYVQGEYGVVNTLYLAADPNFIPVVQDIASGSNMDVDNETFWRVVRLTDGMLTEVPPRLSDTDLQTSRQRILAFLSSHNAYELLPESGKVVALDIDLPVKQAFHILHEQGIPMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKDGKSYLNRQNGHDRAASRLLTHAGPNDNLKDIALKILENEVSTVPIIHSSSEDGSYPQLLHLASLSGILKCICRYFRHCPGSLPVLQLPISAIPLGTWVPKISDSNRRPLAMLRPNASVSSALNLLVQAQVSSVPIVDDNDSLIDIYCRSDITALAKDRVYTHINLDEMTIHQALQLGQDSYSPYELRSQRCQMCLRSDSLHKVMERLATPGVRRLVIVEAGSKRVEGIVSVSDVFKFFVDIINRRSRRKKLDQGFQTKLIDNQGMRGFPPQQEENEVVLYDRHKTRLVRYYGGLVSTMPNFSTIFFFFTLANMSLPGTSSFIGEFLILVGAFQRNSLVGNSN* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01715 589 Gene3D - 145 326 IPR046342 -
Pte11g01715 589 CDD E_set_AMPKbeta_like_N 21 96 - -
Pte11g01715 589 SUPERFAMILY CBS-domain pair 348 487 IPR046342 -
Pte11g01715 589 Gene3D - 334 502 IPR046342 -
Pte11g01715 589 SMART cbs_1 355 403 IPR000644 -
Pte11g01715 589 SMART cbs_1 174 223 IPR000644 -
Pte11g01715 589 SMART cbs_1 437 486 IPR000644 -
Pte11g01715 589 ProSiteProfiles CBS domain profile. 168 230 IPR000644 -
Pte11g01715 589 Pfam CBS domain 440 486 IPR000644 -
Pte11g01715 589 Pfam CBS domain 353 399 IPR000644 -
Pte11g01715 589 Pfam Proton-conducting membrane transporter 525 584 IPR001750 -
Pte11g01715 589 Gene3D Immunoglobulins 20 109 IPR013783 -
Pte11g01715 589 SUPERFAMILY E set domains 20 99 IPR014756 -
Pte11g01715 589 SUPERFAMILY CBS-domain pair 154 326 IPR046342 -
Pte11g01715 589 ProSiteProfiles CBS domain profile. 351 408 IPR000644 -
Pte11g01715 589 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 149 494 - -
Pte11g01715 589 FunFam Sucrose nonfermenting 4-like protein 17 101 - -
Pte11g01715 589 Pfam Glycogen recognition site of AMP-activated protein kinase 20 99 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01715 Pte-Chr11 35853814 35863198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01715 10 119 Protein tyrosine phosphatase (PTP) family AT3G01510 28.319 7.93e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01715 - - gmx:100785692 825.854