Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01685 ATGGAGTGGGATAGTAGCAATTCGGATCTGAGTGGTGAAGACGAAGAAGAAGACAACTTCTTTCTTAACGGTGACGGTGCTGTTGGACCCTTGCCTTTCCCTGTTGAGAACTTGCTTCAGAACGCTCCTTGTGGGTTTGTGGTAACGGATGCTCTTGAACCTGACCATCCTATCATATATGTCAATACTGTGTTCGAAATGGTTACTGGCTATAGAGCTGAGGAAGTACTCGGTCGTAATTGCCGTTTCTTACAATGTCGAGGTCCATTTGCTAAGAGAAGGCATCCATTGGTGGATTCAACTGTAGTTTTTGAAATACGGAGATGTCTTCAGGAAGGGATTGAGTTCCAAGGCAAGTTGTTGAACTTTAAGAAAGATGGATCTCCACTTATGAACAGATTGCGACTGACACCTATATATGGTGATGATGAAACTATCACGCATGTCATTGGGATTCAATTCTTGACAGAAGCAAACATTGACCTTGGTCCAGCGCCTGGTTCTACTTTTAAACAATCTGCAAAACCATCTGATCATTTTCGTTCTGGACTGTCCTCAATGTGTCCGTTTCATGTGGGGGAGCGAAATGTTTCTCGTGGAGTTTGTGGAATATTACAATTGAGTGATGAGGTATTGTCACTGAAGATACTTTCACTTTTAACTCCAAGGGATATTGCATCTCTTAGTTCAGTTTGTAGGCGATTTTATGAGTTGACAAAAAGTGAAGATCTCTGGAGGATGGTATGTCAAAATGCATGGGGTACTGCAACTACCCGTGTTTTGGAGACCGTGCCTGGTGCAAAGAGACTTGGATGGGGTAGGCTGGCAAGGGAATTGACTACTCTTGAAGCAGCAGCTTGGAGGAAGCTGACAGTTAGAGGTGCAGTTGAACCCTCACGTTGTAATTTTGGTGCTTGTGCAGTTGGCAATCGAGTTGTTCTTTTCGGTGGTGAAGGGGTCAACATGCAGCCTATGAATGATACCTTCGTGTTGGATCTAAATTCAAGTAATCCTGAGTGGCAACATGTTCAAGTGAGCTGCCCTCCTCCTGGCCGCTGGGGCCATACTCTTTCTTGTGTTAATGGTTCTCATCTGGTCCTGTTTGGAGGTTGTGGAACACAGGGCTTGATGAATGATGTTTTCCTGCTGGACCTAGATGCAAACCCTCCAACTTGGCGTGAAATCTCGGGAATGGCTCCTCCACTTCCAAGATCATGGCATAGCTCCTGCACCTTGGATGGTACAAAGTTGATAGTTTCTGGTGGATGTGCTGATTCCGGAGTGCTCCTAAGTGACACTTTCCTACTTGATCTTTCAATGGAGAAACCTGTCTGGAGAGAGATACCAGCCTCATGGGCCCCACCTTCTCGGTTGGGTCACACAATGTCTGTTTATGGTGGAAGGAAAATACTGATGTTTGGTGGTCTGGCTAAGAGTGGGACCCTTCGGTTTCGATCAAGTGATGTATACACCATGGACTTGAGTGAGGAGGAACCTTGTTGGAGATGTATCACTGGGAGTGGCATGCCTGGAGCTGGAAATCCAGGAGGGGTGGCTCCTCCACCAAGACTTGATCATGTAGTGGTGAGTCTCCCGGGTGGGAGAATTCTCATCTTTGGTGGCTCTGTGGCTGGACTTCACTCAGCCTCACAGCTTTACATCCTGGACCCAACAGATGAAAAACCTACCTGGAGAATTTTGAATGTGCCAGGGAAGCCCCCAAGATTTGCTTGGGGTCATAGTACGTGTGTTGTTGGAGGTACAAGGGCTATTGTCCTGGGGGGTCAGACAGGAGAGGATTGGATGCTGAGTGAGCTTCACGAGCTTTCTCTTGTAAGTTCTATATCCGAATCTTCTCCCATGGAAGAGCAACCTTAG 1878 0.4665 MEWDSSNSDLSGEDEEEDNFFLNGDGAVGPLPFPVENLLQNAPCGFVVTDALEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVFEIRRCLQEGIEFQGKLLNFKKDGSPLMNRLRLTPIYGDDETITHVIGIQFLTEANIDLGPAPGSTFKQSAKPSDHFRSGLSSMCPFHVGERNVSRGVCGILQLSDEVLSLKILSLLTPRDIASLSSVCRRFYELTKSEDLWRMVCQNAWGTATTRVLETVPGAKRLGWGRLARELTTLEAAAWRKLTVRGAVEPSRCNFGACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVQVSCPPPGRWGHTLSCVNGSHLVLFGGCGTQGLMNDVFLLDLDANPPTWREISGMAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPASWAPPSRLGHTMSVYGGRKILMFGGLAKSGTLRFRSSDVYTMDLSEEEPCWRCITGSGMPGAGNPGGVAPPPRLDHVVVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGKPPRFAWGHSTCVVGGTRAIVLGGQTGEDWMLSELHELSLVSSISESSPMEEQP* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01685 625 FunFam Putative LOV domain-containing protein 482 615 - -
Pte11g01685 625 SUPERFAMILY PYP-like sensor domain (PAS domain) 41 153 IPR035965 -
Pte11g01685 625 ProSiteProfiles PAS repeat profile. 35 113 IPR000014 -
Pte11g01685 625 Gene3D - 200 248 - -
Pte11g01685 625 FunFam Putative LOV domain-containing protein 277 481 - -
Pte11g01685 625 Gene3D - 431 621 IPR015915 GO:0005515
Pte11g01685 625 Gene3D - 282 430 IPR015915 GO:0005515
Pte11g01685 625 Pfam Galactose oxidase, central domain 300 343 - -
Pte11g01685 625 ProSiteProfiles F-box domain profile. 215 248 IPR001810 GO:0005515
Pte11g01685 625 MobiDBLite consensus disorder prediction 1 21 - -
Pte11g01685 625 NCBIfam PAS domain S-box protein 38 152 IPR000014 -
Pte11g01685 625 SUPERFAMILY F-box domain 195 265 IPR036047 GO:0005515
Pte11g01685 625 MobiDBLite consensus disorder prediction 7 21 - -
Pte11g01685 625 CDD PAS 42 152 IPR000014 -
Pte11g01685 625 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 16 613 - -
Pte11g01685 625 Pfam Kelch motif 524 571 IPR011498 GO:0005515
Pte11g01685 625 Pfam Kelch motif 457 507 IPR011498 GO:0005515
Pte11g01685 625 Gene3D PAS domain 28 164 - -
Pte11g01685 625 SUPERFAMILY Galactose oxidase, central domain 286 600 IPR011043 -
Pte11g01685 625 FunFam Adagio protein 1 33 164 - -
Pte11g01685 625 CDD F-box_AtADO-like 203 249 - -
Pte11g01685 625 Pfam PAS domain 43 153 IPR000014 -
Pte11g01685 625 Pfam F-box-like 212 250 IPR001810 GO:0005515
Pte11g01685 625 Pfam Galactose oxidase, central domain 364 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01685 Pte-Chr11 35497183 35503523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01685 39 154 AGC Kinase Gene Family AT5G58140 33.621 2.13e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01685 K12115 - zju:107426639 1102.04