LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte11g01683	ATGGCATACGGCTCCGTGGAGCACCAAAATGAAGCCAATCACAAGAAAAAGCAGTTCGCCATTATAGGTGTATCTTCTGTTCTTTTGGTAGCAATGGTGGCAGCTGTTGCTGTTGGTGTCACCCAAAATGATGAAAGTTCAAACGTAGAAGGAATTTCAACGTCTCAGAGAACGGTGAAGTCACTATGCAAATCCACAGACTACGAGCCCATATGTGAGAAGAGCCTTGCACCTGCAGCCAAAAATAGCAGTGACCCTAAAGAACTTATTAGAGGTGGTTTCAGTTATGCTGTGGATGAGCTTAGAATCATTATAAAGAACTCAAGTGTTTTGCAAGAAGCGGCCAAAGATCCACGAACCAAAGAGGCATATGGCACTTGCAGAGAGCTTATGCATCACGCAATTGATGAATTCAACGTTTCATACAACCAGTTGGGATCCTTTGATATTACAAGTCTACCTGATTACGTACAAGACCTTAAGACCTGGCTGACTGCTGCTATGGCTCACCAAGGGGCTTGCTTGGATGCTTTTGAGAATACAACTGGCAATGCAGGTCATAACATGAAGAAGCTATTGAATACATCAATAGAAATCACCAGCAATGCTCTTGCTATGGTTGACAAATTTTCCGGTCTTTATGCTGATCTCAGTAAAGTTGATGACGATGCAACCACAGGCAGCAGCGGAAGGAAACTCCTCTCACCTTCAACAGGCAATGATGGCTTCCCTTCATGGATCAATGAGGATAAGAGAAGACTCCTAGCAGCCACTCCTGCAACTGTTAAGCCTGATGTTGTTGTGGCCAAGGATGGGAGTGGGAAAGCCAAGACCATAGCCCAGGCGCTTGCACTAGTACCTAAGAAGAATACCAAGACTTTTGTGATTTATATCAAAGCTGGAATTTATAAGGAGACAGTCATCATTGACAAGAAAATGAGCCATGTCATGTTCATCGGAGATGGACAAACCAAGACCAAGATCACTGGAAACAAGAACTTCGTCGATGGCATCAACACCTACCGTACCGCAACAGTTTCTGTGATGGGACCAAATTTCGTTGCGAAAAACATTGGATTTGAGAACACAGCAGGAGCAATCAAGCACCAAGCTGTTGCTTTGAAGGTACAAGCGGACATGGCGACCTTCCACAACTGTCAAATGGATGGTTATCAGGATACCCTCTACACCCACTCCCACAGACAATTCTACCGTGACTGCACAATCACAGGCACCATTGACTTTGTCTTTGGTGATGGTGAAGCAGTACTACAGAACTGTAAGCTTGTTGTGAGAAAGCCGTTGGACAACCAGCAATGCATTGTGACAGCACAAGGCAGGCAAGACAGGCGAGAGAGTTCAGCAATCGTCCTCCAAAACTGCACAATCACAGGAGAACCTGCTTACCTCCCATTGAAGAAAAAGAACAGAGCTTACCTTGGAAGGCCGTGGAAACCGTACTCAAGAACCATCATCATGAATAGTAATCTCGGTGACTTGATTGCACCTGAAGGGTGGCTGCCATGGTCGGGAGACTTTGGAATCAACACATGCTTCTATTCAGAGTTCAACAATAGGGGACCTGGCGCAAATCAAATCAATAGGGTCAAATGGAAGTGTATCCATAAGATCACTGCAGCTACTGCTCAGAGATTCACATCAGGAGCTTTCATTGGTGCAGATAGGTGGATTCCTGCTACTGGAGTTCCCTACACTACTGGCATGATCAAGGCTTAG	1737	0.4525	MAYGSVEHQNEANHKKKQFAIIGVSSVLLVAMVAAVAVGVTQNDESSNVEGISTSQRTVKSLCKSTDYEPICEKSLAPAAKNSSDPKELIRGGFSYAVDELRIIIKNSSVLQEAAKDPRTKEAYGTCRELMHHAIDEFNVSYNQLGSFDITSLPDYVQDLKTWLTAAMAHQGACLDAFENTTGNAGHNMKKLLNTSIEITSNALAMVDKFSGLYADLSKVDDDATTGSSGRKLLSPSTGNDGFPSWINEDKRRLLAATPATVKPDVVVAKDGSGKAKTIAQALALVPKKNTKTFVIYIKAGIYKETVIIDKKMSHVMFIGDGQTKTKITGNKNFVDGINTYRTATVSVMGPNFVAKNIGFENTAGAIKHQAVALKVQADMATFHNCQMDGYQDTLYTHSHRQFYRDCTITGTIDFVFGDGEAVLQNCKLVVRKPLDNQQCIVTAQGRQDRRESSAIVLQNCTITGEPAYLPLKKKNRAYLGRPWKPYSRTIIMNSNLGDLIAPEGWLPWSGDFGINTCFYSEFNNRGPGANQINRVKWKCIHKITAATAQRFTSGAFIGADRWIPATGVPYTTGMIKA*	579

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte11g01683	578	NCBIfam	pectinesterase inhibitor domain	46	209	IPR006501	GO:0004857
	Pte11g01683	578	CDD	PMEI-like_3	61	212	-	-
	Pte11g01683	578	Gene3D	-	259	575	IPR012334	-
	Pte11g01683	578	Pfam	Pectinesterase	265	560	IPR000070	GO:0030599\|GO:0042545
	Pte11g01683	578	SMART	PMEI_2	54	206	IPR006501	GO:0004857
	Pte11g01683	578	ProSitePatterns	Pectinesterase signature 1.	290	309	IPR018040	-
	Pte11g01683	578	FunFam	Pectinesterase	55	211	-	-
	Pte11g01683	578	SUPERFAMILY	Pectin lyase-like	260	574	IPR011050	-
	Pte11g01683	578	PANTHER	PECTINESTERASE	22	565	-	-
	Pte11g01683	578	ProSitePatterns	Pectinesterase signature 2.	409	418	IPR033131	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte11g01683	Pte-Chr11	35482432	35484288	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte11g01683	1	576	Carbohydrate Esterase	AT3G05610	50.775	0.0	627

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte11g01683	K01051		-	zju:107433143	690.649

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