Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01680 ATGGCATACGGCTCCGTGGAGCACCAAAATGAAGCCAATCACAAGAAAAAGCAGTTCGCCATTATAGGTGTATCTTCTGTTCTTTTGGTAGCAATGGTGGCAGCTGTTGCTGTTGGTGTCACCCAAAATGATGAAAGTTCAAACGTAGAAGGAATTTCAACGTCTCAGAGAACGGTGAAGTCACTATGCAAATCCACAGACTACGAGCCCATATGTGAGAAGAGCCTTGCACCTGCAGCCAAAAATAGCAGTGACCCTAAAGAACTTATTAGAGGTGGTTTCAGTTATGCTGTGGATGAGCTTAGAATCATTATAAAGAACTCAAGTGTTTTGCAAGAAGCGGCCAAAGATCCACGAACCAAAGAGGCATATGGCACTTGCAGAGAGCTTATGCATCACGCAATTGATGAATTCAACGTTTCATACAACCAGTTGGGATCCTTTGATATTACAAGTCTACCTGATTACGTACAAGACCTTAAGACCTGGCTGACTGCTGCTATGGCTCACCAAGGGGCTTGCTTGGATGCTTTTGAGAATACAACTGGCAATGCAGGTCATAACATGAAGAAGCTATTGAATACATCAATAGAAATCACCAGCAATGCTCTTGCTATGGTTGACAAATTTTCCGGTCTTTATGCTGATCTCAGTAAAGTTGATGACGATGCAACCACAGGCAGCAGCGGAAGGAAACTCCTCTCACCTTCAACAGGCAATGATGGCTTCCCTTCATGGATCAATGAGGATAAGAGAAGACTCCTAGCAGCCACTCCTGCAACTGTTAAGCCTGATGTTGTTGTGGCCAAGGATGGGAGTGGGAAAGCCAAGACCATAGCCCAGGCGCTTGCACTAGTACCTAAGAAGAATACCAAGACTTTTGTGATTTATATCAAAGCTGGAATTTATAAGGAGACAGTCATCATTGACAAGAAAATGAGCCATGTCATGTTCATCGGAGATGGACAAACCAAGACCAAGATCACTGGAAACAAGAACTTCGTCGATGGCATCAACACCTACCGTACCGCAACAGTTTCTGTGATGGGACCAAATTTCGTTGCGAAAAACATTGGATTTGAGAACACAGCAGGAGCAATCAAGCACCAAGCTGTTGCTTTGAAGGTACAAGCGGACATGGCGACCTTCCACAACTGTCAAATGGATGGTTATCAGGATACCCTCTACACCCACTCCCACAGACAATTCTACCGTGACTGCACAATCACAGGCACCATTGACTTTGTCTTTGGTGATGGTGAAGCAGTACTACAGAACTGTAAGCTTGTTGTGAGAAAGCCGTTGGACAACCAGCAATGCATTGTGACAGCACAAGGCAGGCAAGACAGGCGAGAGAGTTCAGCAATCGTCCTCCAAAACTGCACAATCACAGGAGAACCTGCTTACCTCCCATTGAAGAAAAAGAACAGAGCTTACCTTGGAAGGCCGTGGAAACCGTACTCAAGAACCATCATCATGAATAGTAATCTCGGTGACTTGATTGCACCTGAAGGGTGGCTGCCATGGTCGGGAGACTTTGGAATCAACACATGCTTCTATTCAGAGTTCAACAATAGGGGACCTGGCGCAAATCAAATCAATAGGGTCAAATGGAAGTGTATCCATAAGATCACTGCAGCTACTGCTCAGAGATTCACATCAGGAGCTTTCATTGGTGCAGATAGGTGGATTCCTGCTACTGGCGTTCCCTACACTACTGGCATGATCAAGGCTTAG 1737 0.4531 MAYGSVEHQNEANHKKKQFAIIGVSSVLLVAMVAAVAVGVTQNDESSNVEGISTSQRTVKSLCKSTDYEPICEKSLAPAAKNSSDPKELIRGGFSYAVDELRIIIKNSSVLQEAAKDPRTKEAYGTCRELMHHAIDEFNVSYNQLGSFDITSLPDYVQDLKTWLTAAMAHQGACLDAFENTTGNAGHNMKKLLNTSIEITSNALAMVDKFSGLYADLSKVDDDATTGSSGRKLLSPSTGNDGFPSWINEDKRRLLAATPATVKPDVVVAKDGSGKAKTIAQALALVPKKNTKTFVIYIKAGIYKETVIIDKKMSHVMFIGDGQTKTKITGNKNFVDGINTYRTATVSVMGPNFVAKNIGFENTAGAIKHQAVALKVQADMATFHNCQMDGYQDTLYTHSHRQFYRDCTITGTIDFVFGDGEAVLQNCKLVVRKPLDNQQCIVTAQGRQDRRESSAIVLQNCTITGEPAYLPLKKKNRAYLGRPWKPYSRTIIMNSNLGDLIAPEGWLPWSGDFGINTCFYSEFNNRGPGANQINRVKWKCIHKITAATAQRFTSGAFIGADRWIPATGVPYTTGMIKA* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01680 578 NCBIfam pectinesterase inhibitor domain 46 209 IPR006501 GO:0004857
Pte11g01680 578 CDD PMEI-like_3 61 212 - -
Pte11g01680 578 Gene3D - 259 575 IPR012334 -
Pte11g01680 578 Pfam Pectinesterase 265 560 IPR000070 GO:0030599|GO:0042545
Pte11g01680 578 SMART PMEI_2 54 206 IPR006501 GO:0004857
Pte11g01680 578 ProSitePatterns Pectinesterase signature 1. 290 309 IPR018040 -
Pte11g01680 578 FunFam Pectinesterase 55 211 - -
Pte11g01680 578 SUPERFAMILY Pectin lyase-like 260 574 IPR011050 -
Pte11g01680 578 PANTHER PECTINESTERASE 22 565 - -
Pte11g01680 578 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Pte11g01680 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
Pte11g01680 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Pte11g01680 578 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Pte11g01680 578 FunFam Pectinesterase 259 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01680 Pte-Chr11 35437268 35439124 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01680 1 576 Carbohydrate Esterase AT3G05610 50.775 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01680 K01051 - zju:107433143 690.649