Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01678 ATGGGGAATGGCGATGCGATTTCTCTTGAGGACATAAAAAATGAGACAGTTGATCTGGAACGCATCCCCGTTGAGGAAGTGTTTGAGCAACTGAAATGTACGAAACAAGGTTTAACCACAGAAGAAGGGAACAACAGGCTTCAAATATTTGGACCCAACAAACTAGAAGAGAAAAAGGAAAGCAAACTGCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTTTCATGGGTTATGGAAGCTGCAGCTATAATGGCCATTGCACTTGCCAATGGTGATGGGAAACCCCCGGACTGGGAAGACTTTTTGGGTATTGTCTGCCTGCTTGTGATCAACTCCACCATCAGTTTCATTGAGGAAAATAATGCGGGCAATGCTGCGGCTGCTCTTATGGCTGGTCTTGCTCCCCAGACAAAGGTTCTAAGAGATGGTAGATGGACAGAGCAAGAAGCCGCGATTCTTGTCCCAGGAGACATTATTAGCATTAAACTAGGTGATATCATTCCTGCTGATGCGCGTCTTCTCGAAGGTGATCCCCTAAAGGTTGATCAATCCGCCCTCACTGGAGAATCACTTCCTGTGACCAAGAATCCTGGGGATGAGGTTTTCTCAGGGTCGACTTGCAAACAAGGTGAAATTGAAGCGGTTGTTATCGCCACTGGTGTCCATACCTTCTTCGGCAAGGCAGCGCATCTTGTAGACAGCACCAACCAAGTTGGGCATTTCCAGAAGGTGCTTACAGCAATAGGAAACTTTTGTATATGTTCAATTGCAATTGGTATGTTGGTGGAGATCATCGTCATGTATCCAATTCAGCATCGCAAGTATAGAGATGGCATTAACAACCTTTTGGTCCTCTTGATTGGTGGAATACCAATTGCTATGCCCACTGTCCTGTCTGTAACAATGGCTATAGGTTCACATAAGCTCTCTCAGCAGGGTGCTATTACCAAGAGAATGACAGCCATTGAAGAAATGGCTGGCATGGATGTCCTCTGCAGCGACAAAACTGGAACACTCACCCTTAACAAGCTAAGCGTTGACAGAAACTTGATCGAGGTTTTTGCTAAAGGAGTAGAAAAGGAACATGTCATGCTTCTTGCTGCTAGAGCTTCGAGGACAGAAAATCAAGATGCCATAGATGCTGCCATTGTGGGAATGCTTGCGGACCCCAAAGAGGCACGAGCTGGAATCCAGGAGGTTCACTTCTTCCCCTTCAATCCAGTGGACAAGAGAACGGCTTTGACTTACATTGATGCAAATGGAAACTGGCACCGTGCTAGTAAAGGTGCTCCCGAGCAGGTAATCTTATGCCCTTCCTTGTTAACCTTGAGATGTTTCCACTCGTACAAGTGTCCTAAAATAAATTTTAAATCGCAGATCATGACATTATGCAATCTCAAAGAGGACATGAAGAAGAAGGTGCACGGAATTATTGACAAGTTTGCCGAACGTGGACTTCGTTCCTTGGCTGTGGCTAGACAGGAAGTTCCCCAGAAAAGTAAAGAAAGTGAAGGTGCCCTGTGGCAATTTGTTGGTTTGTTGTCACTCTTTGATCCACCTAGACATGACAGTGCTGAAACTATCCGAAGGGCTCTTAATCTCGGCGTGAATGTCAAAATGATAACCGGTGACCAACTTGCGATAGCAAAGGAGACTGGTCGGAGACTTGGAATGGGAACAAATATGTACCCATCTGCCTCGTTACTCGGTCAAGACAAAGATGCTAACATTGCTGCACTTCCCGTTGAAGAGTTGATTGAGAAAGCGGACGGGTTTGCTGGAGTATTTCCAGAGCATAAATACGAAATTGTGAAGAAGCTACAAGAGAGAAAGCATATTGTTGGAATGACTGGAGATGGTGTCAATGATGCCCCTGCTTTAAAGAAGGCAGATATAGGAATTGCTGTAGCTGATGCAACTGATGCTGCACGAGGTGCTTCAGATATTGTCCTTACAGAACCTGGATTAAGTGTTATTATCAGTGCTGTGTTAACTAGTAGAGCAATTTTCCAAAGATTGAAGAACTATACAGGTATTAAATCAATATTGTTCTTTTTGGTGCAGTTTGGATTCATGCTTATTGCATTGATATGGAAATTCGACTTTTCTCCGTTCATGGTTTTGATTATTGCCATTCTAAATGATGGAACAATCATGACAATTTCGAAAGATAGGGTAAAGCCATCACCTCTGCCTGATAGCTGGAAACTAAAAGAGATATTTGCCACTGGGGTTGTGCTTGGAGGCTACTTGGCACTTATGACAGTCATATTCTTCTGGTTGATGAAAGATACTCACTTCTTCCATGATAAATTTGGAGTGAAAAATCTTCATGACAGTCCTGATGAGATGATGGCTGCTCTGTACTTACAAGTTAGCATTGTGAGCCAAGCTCTCATTTTTGTGACTAGGTCTCGCAGCTGGTCATTCATTGAAAGACCTGGACTGCTTTTAGTTACCGCTTTCATAATTGCCCAACTGGTTGCTACACTGATAGCTGTATATGCCAACTGGGGTTTTGCAAACATCAAAGGGATGGGTTGGGGCTGGGCTGGAGTTGTCTGGCTTTATAGTATTGTCTTCTATGTCCCACTAGACTTGATGAAGTTTACAATCCGTTACATCCTAAGTGGCAAGGCTTGGACCAACATGTTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTCTTGCTCAGAGGACTTTGCATGGGCTTCAGCCAGCTGAAACTAGCAATCTTTTCAGTGACAAGAGTAGCTATAGAGAATTATCTGAGATTGCTGAGCAGGCTAAGAGAAGAGCTGAAATTGCAAGGCTTCGTGAGATTAGCACTCTTAAGGGACACGTTGAGTCAGTGGCAAAGCTAAAAGGTCTGGACATTGATACAATTCAACAGCACTATACAGTGTGA 2943 0.4404 MGNGDAISLEDIKNETVDLERIPVEEVFEQLKCTKQGLTTEEGNNRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDGKPPDWEDFLGIVCLLVINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGRWTEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKEHVMLLAARASRTENQDAIDAAIVGMLADPKEARAGIQEVHFFPFNPVDKRTALTYIDANGNWHRASKGAPEQVILCPSLLTLRCFHSYKCPKINFKSQIMTLCNLKEDMKKKVHGIIDKFAERGLRSLAVARQEVPQKSKESEGALWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDANIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRLKNYTGIKSILFFLVQFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMKDTHFFHDKFGVKNLHDSPDEMMAALYLQVSIVSQALIFVTRSRSWSFIERPGLLLVTAFIIAQLVATLIAVYANWGFANIKGMGWGWAGVVWLYSIVFYVPLDLMKFTIRYILSGKAWTNMLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPAETSNLFSDKSSYRELSEIAEQAKRRAEIARLREISTLKGHVESVAKLKGLDIDTIQQHYTV* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01678 980 Gene3D - 344 517 IPR023299 GO:0000166
Pte11g01678 980 SFLD Haloacid Dehalogenase 314 668 - -
Pte11g01678 980 CDD P-type_ATPase_H 37 870 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte11g01678 980 Gene3D - 929 980 - -
Pte11g01678 980 Coils Coil 931 951 - -
Pte11g01678 980 NCBIfam HAD-IC family P-type ATPase 592 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 NCBIfam HAD-IC family P-type ATPase 104 350 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 Gene3D - 135 219 - -
Pte11g01678 980 Coils Coil 980 980 - -
Pte11g01678 980 SUPERFAMILY HAD-like 328 664 IPR036412 -
Pte11g01678 980 FunFam ATPase 4 plasma membrane-type 602 844 - -
Pte11g01678 980 Pfam E1-E2 ATPase 134 311 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 534 544 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 512 523 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 640 652 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Pte11g01678 980 PRINTS P-type cation-transporting ATPase superfamily signature 617 636 - -
Pte11g01678 980 FunFam Plasma membrane ATPase 135 219 - -
Pte11g01678 980 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 876 IPR023298 -
Pte11g01678 980 Gene3D - 329 654 IPR023214 -
Pte11g01678 980 FunFam Plasma membrane ATPase 509 665 - -
Pte11g01678 980 FunFam Plasma membrane ATPase 344 517 - -
Pte11g01678 980 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Pte11g01678 980 PRINTS H+-transporting ATPase (proton pump) signature 648 673 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 PRINTS H+-transporting ATPase (proton pump) signature 617 633 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 PRINTS H+-transporting ATPase (proton pump) signature 474 492 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 PRINTS H+-transporting ATPase (proton pump) signature 789 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte11g01678 980 Gene3D - 97 844 - -
Pte11g01678 980 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Pte11g01678 980 Pfam haloacid dehalogenase-like hydrolase 328 631 - -
Pte11g01678 980 PANTHER CALCIUM-TRANSPORTING ATPASE 20 912 - -
Pte11g01678 980 SFLD p-type atpase 314 668 IPR044492 -
Pte11g01678 980 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Pte11g01678 980 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01678 Pte-Chr11 35382497 35388094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01678 8 981 Primary Pumps ATPases AT4G30190 80.536 0.0 1601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01678 K01535 - zju:107403657 1667.9