Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01665 ATGGCTTTAGATCTTGTAGGTAGTCTCTCAGGGATGGACGACCAGTTGGCTATTGAAGAAGCTGCATCATCTGGGTTGAAGAGCATGCAACATCTTATTTCTCTTATGGCTCATCAACAAGAGGTTAACTGTACGGAACTAGCTGACTTCACCGTGTCGAAGTTCAAGCAAGTTATCAAGTTATTGAACCGGACCGGTCATGCTCGTTTTCGCCAGAAGCCAACTAACAACCCTTCTACATCTTCACAACCTGAGCCGACAAAGCCAGTCGGGTTCCAGCACCACCAGCCGAAAAATACCGATCTAGATCTCAATCTCAATCTCCGTTTCAGCGAAAATCCGGTTCGGCCGCCGGTCCAACCAGTTCAGAACTCAACTCAGACTTGCTCTCTGGATTTCGTGAAAAACATCCCTACGGTAAAGTCAGCTAAGAAACCCTCTTTTGACTTTGAGCAGACCCGGCTGTCCCACTGCTCTAAAGACTCTTCGTTTAATGTATCTCCTCCCGTGTCTTCGTCAACGACATCGTCGTTTATGTCTACTATTACTGGAGACGGAAGCGTCTCAAATGGAAAGTTAGGTCGGACCCTGTTCGGTCCTCCGACTACGACCCTATCCGCTGGCAAATTGCCGTTATCGTCATCACATCGGAAGAAATGTCCCGACGCTGGTCTTGCTGCTGGGAAATCGGGAAAAATCTCTTCCACCGGCCGCTGCCATTGCTCGAAGAGAAGACGATCTCGAGTGAAACACACAGTACGAGTACCCGCGGTAAGTTCGAAGATCGCGGATATTCCACCAGACGAGTACTCATGGAGAAAGTACGGTCAAAAGCCGATCAAGGGCTCCCCATTCCCTCGAGGTTACTACAAGTGCAGTACAATGAAAGGGTGCCCAGCAAGGAAGCACGTGGAGAGAGCAATCGATGATCCGAAAATGCTTATCGTGACCTACGAGGGTGAGCACCGTCACCAACACGATAGAGTTACGGGAACAGTTAACGGCGGTAACGCGATGATGATGATGCAGTAA 1032 0.4932 MALDLVGSLSGMDDQLAIEEAASSGLKSMQHLISLMAHQQEVNCTELADFTVSKFKQVIKLLNRTGHARFRQKPTNNPSTSSQPEPTKPVGFQHHQPKNTDLDLNLNLRFSENPVRPPVQPVQNSTQTCSLDFVKNIPTVKSAKKPSFDFEQTRLSHCSKDSSFNVSPPVSSSTTSSFMSTITGDGSVSNGKLGRTLFGPPTTTLSAGKLPLSSSHRKKCPDAGLAAGKSGKISSTGRCHCSKRRRSRVKHTVRVPAVSSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTMKGCPARKHVERAIDDPKMLIVTYEGEHRHQHDRVTGTVNGGNAMMMMQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01665 343 Pfam Plant zinc cluster domain 217 264 IPR018872 -
Pte11g01665 343 SUPERFAMILY WRKY DNA-binding domain 264 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01665 343 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01665 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 326 IPR044810 GO:0003700
Pte11g01665 343 MobiDBLite consensus disorder prediction 189 238 - -
Pte11g01665 343 MobiDBLite consensus disorder prediction 189 211 - -
Pte11g01665 343 Gene3D WRKY domain 239 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte11g01665 343 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte11g01665 343 MobiDBLite consensus disorder prediction 69 89 - -
Pte11g01665 343 MobiDBLite consensus disorder prediction 66 99 - -
Pte11g01665 343 MobiDBLite consensus disorder prediction 159 178 - -
Pte11g01665 343 FunFam WRKY transcription factor 65 250 327 - -
Pte11g01665 343 Pfam WRKY DNA -binding domain 268 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01665 Pte-Chr11 35263337 35265212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01665 1 335 WRKY Transcription Factor Family AT2G24570 49.138 1.81e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte11g01665 WRKY 3.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01665 - - qsa:O6P43_022388 351.288