Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01649 ATGGCTCCAAGAATCCTTCTATGTGGCGATGTATTTGGACGCCTCAACCAACTCTTCAAGCGAGTCTCATCGGTCAACAAATCGGCGGGTCCGTTCGACGCCATATTTTGCGTGGGTCAGTTTTTTCCGGACTCACCAGACCAGCTCAATGAGTTTATGGATTATATTGAAGGTCGTTCCCAAGTTCCTCTGCCTACTTACTTCACTGGTGATTACGGTGTTGGCGCTCCCAAGGTTTTATTGGCTGCTTCAAAGGACTCTGCTAACCTAGGCTTCAAGATGGACGGCTTGAAAGTATGTCAGAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCACCACATTAGGATTATCTGTGGTTTATTTGTCTGGTAGAAAGTCATCAGATGTACAACAATTTGGCGTCTACACTCAAGATGATGTTGATGCTTTACGAGCAATAGCTGAGGAGCCAGGAATAGTTGACCTGTTCCTAAGTAATGAATGGCCAAGTGGTGTCACCAATGGATCTGATGCTTCAAATGTTCCAGCTGGAATAACTGATTTAGATGGCAGTGACTCGACCATCTCAGATTTAGTAGCAGAGATTAAACCACGTTATCATATTGCAGGTACTAAAGGAATTTTCTATGCACGTGAACCTTATTCCAATATTGATGCTGTCCATGTAACTCGTTTCTTTGGTCTTGCGCCTGTTGGAAACAAAGAGAAACAGAAATTTATTCATGCAATTTCTCCGACTCCAGCAACTACCATGTCTTCGGCTGAGATTGCTACAAAGCCTTCAAATACGACCTTATCACCATACACATCTGTGGAAAAGGCAACTCCTGGTACAGAATTCACAAAAAGATCTGGTGATGACATCGAGGCTCAATTTTGGAGGTATGATGTATCTAATAAGCGACAAAAGCATGGTGGTGGAGATAGTGAGAAGCTGTGTTTCAAATTTCTTTCCTCTGGTTCTTGTCAACGAGGTGAAAAGTGTAATTTTCGACACGATATGGATGCAAAAGAACAGTATCAGAGAGGTGTTTGTTTTGACTTTCTGAACAAGGGTAAATGTGAAAGGGGTCCAGATTGCAGTTTCAAGCACAGCTTGCATGATGATGGTGACGGTCATTCACATAAGAGACATGTCTCTGAGAATGCAAGGTCAAAAGAGTGTTGGTTTTGCTTATCTAGCCCTAATGTGGAGTCACATCTGATCATCAGCATTGGAGAATTTTACTACTGTGCATTGCCTAAAGGCCCGCTTGTTGATGATCATGTGTTGATAATTCCAATTGAGCATATGCCCAGTACGCTCTCTATGTCATCAGACACTGAAATTGAGCTTGGCAAATTTCAGCATAGTTTAAAGAAGTATGGTGAAAGCCGAGGAAATGAAGTGGTCTTCTTTGAGTGGGTTTCCAGACGCAGTACTCATGCTAATCTTCAGGCAATTGCGATCCCATCATCCAGGGCATCTTTTGTTCAGAAAGCATTCAGTATGGCAGCTAAAAAGTTGGGATTTGAATTTGTGGCATCAAAGATAAATAGTGGTTCAGAAGCAAGAAAATTCTTGAGAACCCAAACTGGTAGAAATTTAAGTCTCTTCTATGCTGAAATACCTGGAGGTACTGTATTATCTCATCAAGTTGAAGAGAATGAGAAATTCCCAGCTCAATTTGGACGTGAGGTCCTTGCAGGGTTACTTAACATGGCAGATAAAGCAGATTGGAGAAACTCTAAGGATAGCAAGGGGGAGGAAATGAAGATGGCTGAAGATTTCAAGAATCGCTTTCAACAATATGACCCGAACAATTGA 1809 0.419 MAPRILLCGDVFGRLNQLFKRVSSVNKSAGPFDAIFCVGQFFPDSPDQLNEFMDYIEGRSQVPLPTYFTGDYGVGAPKVLLAASKDSANLGFKMDGLKVCQNLYWLKGSGKFTTLGLSVVYLSGRKSSDVQQFGVYTQDDVDALRAIAEEPGIVDLFLSNEWPSGVTNGSDASNVPAGITDLDGSDSTISDLVAEIKPRYHIAGTKGIFYAREPYSNIDAVHVTRFFGLAPVGNKEKQKFIHAISPTPATTMSSAEIATKPSNTTLSPYTSVEKATPGTEFTKRSGDDIEAQFWRYDVSNKRQKHGGGDSEKLCFKFLSSGSCQRGEKCNFRHDMDAKEQYQRGVCFDFLNKGKCERGPDCSFKHSLHDDGDGHSHKRHVSENARSKECWFCLSSPNVESHLIISIGEFYYCALPKGPLVDDHVLIIPIEHMPSTLSMSSDTEIELGKFQHSLKKYGESRGNEVVFFEWVSRRSTHANLQAIAIPSSRASFVQKAFSMAAKKLGFEFVASKINSGSEARKFLRTQTGRNLSLFYAEIPGGTVLSHQVEENEKFPAQFGREVLAGLLNMADKADWRNSKDSKGEEMKMAEDFKNRFQQYDPNN* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01649 602 Pfam Protein similar to CwfJ C-terminus 1 379 496 IPR006768 -
Pte11g01649 602 Gene3D - 367 486 IPR036265 -
Pte11g01649 602 Gene3D - 297 366 - -
Pte11g01649 602 ProSiteProfiles Zinc finger C3H1-type profile. 308 336 IPR000571 GO:0046872
Pte11g01649 602 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 601 IPR040194 -
Pte11g01649 602 SMART c3hfinal6 342 367 IPR000571 GO:0046872
Pte11g01649 602 SMART c3hfinal6 310 335 IPR000571 GO:0046872
Pte11g01649 602 MobiDBLite consensus disorder prediction 261 282 - -
Pte11g01649 602 SUPERFAMILY CCCH zinc finger 312 337 IPR036855 GO:0046872
Pte11g01649 602 SUPERFAMILY CCCH zinc finger 340 369 IPR036855 GO:0046872
Pte11g01649 602 ProSiteProfiles Zinc finger C3H1-type profile. 340 368 IPR000571 GO:0046872
Pte11g01649 602 Pfam Protein similar to CwfJ C-terminus 2 520 599 IPR006767 -
Pte11g01649 602 MobiDBLite consensus disorder prediction 261 278 - -
Pte11g01649 602 CDD MPP_CWF19_N 6 232 - -
Pte11g01649 602 FunFam Zinc finger CCCH domain-containing protein 59 368 491 - -
Pte11g01649 602 SUPERFAMILY HIT-like 387 455 IPR036265 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte11g01649 CwfJ_C_1 1.7e-36 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01649 K24939 - qsa:O6P43_022416 929.472