Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01644 ATGACAATGGGTTTCCATCGCCATCGTCATTCACATTTGAAGAGCAACACTTACAGTACTCTAGTTCGCATTCTGTCTCACTTCTACAATGATTCTCACTGTTCTTGCACCGAGCAAATTAATGTTCCCACTGAGGAACCTAAACCAGCTGATAGTAGTGATCTCAGGGTGAAAAGTATGGTGGAAGTGTCTGAGAACTTTGAATTCGTCAGTCACGGTCAGATGGGTACCAAGGATTCTCTGATTCAGAAAGAAGCAATCAGTGAAGAATTGGATGGTAAAGGCATCCAGCAAAGGAATTTGAGTGAAACAAAGATGGCTGTAGACAATATACAGTTTATGATGGGATTGAAAGAAGATCAGGATTCATCTTGTCAGAGCATGATGATTTGTGGGAGCAGTGAGAAGACTGCCTCCAAAAATATTTGTTTTCCACAGGAACAAATTCTAATTGATGAATCGGAGCATCTTGTGAATGGGACAGAAATATGTGAATCTAAAAGTCCCATTAATTCCTTAAAGACAAGGTTGCAAGAGAACCAAAGTGGCAACTGTGAAGTTGGCTTAATTAACTTAGAAACGCAGGGAGAATTTCAACAATCTTTCATGGGTAAGTCTGGAAGTTCAGGTTTGTCACAATTAGAGGAATTGAATAATGCTGAGGATAGAAGGAATTCATGTATGCTCGAGGAAGGGGTCATGGAAGAAGGAGAAATATCTGATGATTCTTGCATATATGATGAATCATCTACACAGGCCACAATTCTAGATAAGGTTTGTGAGGAGCAAAAGGCCAACGGAATTGTTAACTTTGTAGCTGACAAATGTCGCATATCTGATAATGAGGAAGAAGCAAAATCCATCTCTCATGTTCAAGGTTTGCTAGCATGTGAAGATGGCAAGCTAGTGTCTGACCTAAGCATGATCTCTGAAAAGCCTGGCTGGGATAATACAATGGTAGAGCTTCAAATAGATAAATTCCATAATAGTGTAGCTGATAATGAGTTGGAAACAGCTCCTATTGATGACCAAATATCACGTTGGCATGTCTTGGAAGGAAGAACTGTTGCAACTTTTGAGAGCGAGGGTGCTAATGGTGGGATTCAACAGCATGGTGGTTCTTCTCTAGAAAGAAGGGAAGACAAGAAGGATACTGATATTATAAGTAAAACGAAACGTGGCCCTCGTTCGGAAGCAAGCAAAGCTAAGAGAAAGGAAAAGAAACGGAGGCAGCGAGCATCAAAGAATAGAAAGCTTGGGGTTAAAAGGTTGAAGCTGATGCCAGTGTTAAAACCAAAAACTGTCAATTATTGCCGCCATTATCTGCAGGGAAGGTGCACTGAGGGAGAGAAGTGCAATTTTTCTCATGATGCTGTGCCTTTGACAAAATCTCGGCCATGCAGTTTCTTTGCTCGTAATACATGTATGAAAGGGGATGACTGTCCCAATGACCATGACCTTTCCAAATATCCCTGCCTCAAGTTGGAAACGAGTGGTTATTGTCACAGGGGTGATGCTTGTAAGTTTTCACACAAGAAAGCAACAAATACAGACTTATCTGTTGCTCCAAATGGTTGCAAATCATCATTGAATCCTCCACCCTTGCAAGGGAATCTTAAGTCTAAGCAGAAAATTCGCATTTCTGATACCGGCAACCTTCATTCTCGTGAAATTGGAGACTCTCTTGTTGCTTCAAACGGTTGCATAGCGGACTTGACTCCTCCATCTTTTCAAGGAAATGTGAAGATAAGGCAGAAAATTGGGGTTGCTGATTCAGATGATCTTCCTTCTTGTGGAAGTGGAGATTGTAAGACGCCAGACATGGCTCAGAAGTCACTATGGCCAGCACCTAAAGGAATTACTTTCCTAAATGTTCCAAAATCATCTGTCGACGTTAATGGGCTTGAACAACGAATGTCTTTGCCACAAAGCCATAGTGGAAACTCAACTCAGAATCAAATAGGCAATATTCCATCAGTCACTACTCAAACTGTAAATGAGGTTCCACCTAAAAGATTATCAACAACACCAAAGGGTATCAATTTTCTGGCATTTGGCAAGTCTCAGTTAGATTCTTCCATTTCCAAGGGTCCAAAGGGCTCTTGTTTGGATAAGAGCAGTATGGTATCTTCTATATCCAAGTTTGGTCTTGCTAAACCAGGTGTCTGTTCTCCGCTTATGAACATGAAATTTGGGGATGGGAAGGACAAAAGGATACACCAAACTTTCCTGCATACAAATGAGATGGCATCTGAAGCTGCAGTATCTATGGAAGGAAGGAATGGTTTAGGTGAAGCGACTCCAATGCTTGAATCTAAAAGCATACTGCATTCTCGTTCTTATGATAATATCAACACATCTGTTAAAGATAGTACCGATGCACCTGAGAACCCTCACTCATCTAGTTTAATATCTAACAAGCTTTTGTTCCTGCAAGGTTCTGTTCGATCTTTTGATTCCCTGCTGTCTGGCAGTTCTAGGAACAAATTGGTCTCATCTCATAAGGCACTTTTGTCAACCTTAGCATTTGCAGCAGATTATGAACCAGATGTTAAGATGAAGTGA 2565 0.4094 MTMGFHRHRHSHLKSNTYSTLVRILSHFYNDSHCSCTEQINVPTEEPKPADSSDLRVKSMVEVSENFEFVSHGQMGTKDSLIQKEAISEELDGKGIQQRNLSETKMAVDNIQFMMGLKEDQDSSCQSMMICGSSEKTASKNICFPQEQILIDESEHLVNGTEICESKSPINSLKTRLQENQSGNCEVGLINLETQGEFQQSFMGKSGSSGLSQLEELNNAEDRRNSCMLEEGVMEEGEISDDSCIYDESSTQATILDKVCEEQKANGIVNFVADKCRISDNEEEAKSISHVQGLLACEDGKLVSDLSMISEKPGWDNTMVELQIDKFHNSVADNELETAPIDDQISRWHVLEGRTVATFESEGANGGIQQHGGSSLERREDKKDTDIISKTKRGPRSEASKAKRKEKKRRQRASKNRKLGVKRLKLMPVLKPKTVNYCRHYLQGRCTEGEKCNFSHDAVPLTKSRPCSFFARNTCMKGDDCPNDHDLSKYPCLKLETSGYCHRGDACKFSHKKATNTDLSVAPNGCKSSLNPPPLQGNLKSKQKIRISDTGNLHSREIGDSLVASNGCIADLTPPSFQGNVKIRQKIGVADSDDLPSCGSGDCKTPDMAQKSLWPAPKGITFLNVPKSSVDVNGLEQRMSLPQSHSGNSTQNQIGNIPSVTTQTVNEVPPKRLSTTPKGINFLAFGKSQLDSSISKGPKGSCLDKSSMVSSISKFGLAKPGVCSPLMNMKFGDGKDKRIHQTFLHTNEMASEAAVSMEGRNGLGEATPMLESKSILHSRSYDNINTSVKDSTDAPENPHSSSLISNKLLFLQGSVRSFDSLLSGSSRNKLVSSHKALLSTLAFAADYEPDVKMK* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01644 854 MobiDBLite consensus disorder prediction 360 419 - -
Pte11g01644 854 Pfam CCCH-type zinc finger 438 457 IPR041367 -
Pte11g01644 854 Gene3D - 463 528 - -
Pte11g01644 854 ProSiteProfiles Zinc finger C3H1-type profile. 432 459 IPR000571 GO:0046872
Pte11g01644 854 ProSiteProfiles Zinc finger C3H1-type profile. 461 488 IPR000571 GO:0046872
Pte11g01644 854 MobiDBLite consensus disorder prediction 640 662 - -
Pte11g01644 854 Gene3D - 397 462 - -
Pte11g01644 854 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 354 852 IPR045124 GO:0003723|GO:0045892
Pte11g01644 854 SUPERFAMILY CCCH zinc finger 433 457 IPR036855 GO:0046872
Pte11g01644 854 MobiDBLite consensus disorder prediction 374 401 - -
Pte11g01644 854 SUPERFAMILY CCCH zinc finger 490 517 IPR036855 GO:0046872
Pte11g01644 854 ProSiteProfiles Zinc finger C3H1-type profile. 491 514 IPR000571 GO:0046872
Pte11g01644 854 SMART c3hfinal6 489 513 IPR000571 GO:0046872
Pte11g01644 854 SMART c3hfinal6 433 458 IPR000571 GO:0046872
Pte11g01644 854 SMART c3hfinal6 461 487 IPR000571 GO:0046872
Pte11g01644 854 MobiDBLite consensus disorder prediction 402 419 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte11g01644 zf-CCCH_4 1.1e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01644 - - aprc:113854397 302.753