Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01643 ATGCTTTCTTCTTTTCAGTTCTCGGATGGGAGATGCATTAATTGGTCAGCATCTGGGATGTGCTTGGCTGAAATCAGACAGGAAAAGGTGTCAGTTAGGAGTGTTGCCTCTTCTTTTAACGAAATCGAGCATTTCAATGAATGTGAGTCTGGCATATCTTCTTGTACTAAAATAGCCTTCTTTCAATACAAACAACAGAGTGCTATACTGAAAGTCCTTGAGATGAAGACAGGCGTAATCAGAAAAACTTTTGATGGACTGTCACGTGTTGATATGGAAATTGTGACATCAACAGTTAATTGGCCTGTAATAAGATGGTTTGGTGAAGACGACAAGTTTTTTGCCAGAATTGGAACTAACGTTCTGTCTGTCTATGACACCGAAACTTTCTCACCAGTCGCTGAATTTGAAAATGTTCGAAATTTTAGTTGCTCACCTGCCAATACCATACTGGCGACATTTGGGATTCCACTTGATGGCTGCGATGAGAGCCCCTCGATCAAACTGCTTGAAATTCCTAGTAAAAAGGTGTTATGGGAGACAATGGTTGTGGAGGCTCAAAATTGCCAAGTGTTTTGGCAATGCAAGGGGGACTATGTGGCGTTCCTCCTTGATAAAAGCTCAGAGAGACTTCCTGGGACTTATGCCACTATTCTAATTTTTAGAATCGAAATTAGTGATGCTGCTATCGCAATAACTCCAGTTCAGTTCTTAGGTCGTGAGTTGGATAGCAAGATTGTTGCATTTTCCTGGGAACCAAAAGGCCACAGATTCTCAGTTGCCCAAGCTGGATCAAATATAGCCATAGATTTGTACTCCTTGCATGGTCCATTGCAATCTCCGTTGAAGCTCACTTCAATTCCAGAGGTTCCTGCGAGCTTTATTTTCTGGTCACCTGTAGGCCGTTTTCTTGTAATTGTGGGATTGACCGATCAAAGTGGACATCTAACTTTCTATGATGCTGATGAGAGTGAGGTGCTAGCTACTCAGGAGTGCATGGCAATGGATGTCCAGTGGGACCCCTTAGGAAGGAATGAAGATTTGGTCTTATTCTGGAGAGCTGCTCTATCAAATTCAAGGAATGAATTTATCACAGTTCTGTTGGCGTCCTATTCCAAAATCTTAGAACCTCCAAAGAGTCCTAAGCCAACAGACGAGAAAGCAGCTGGATCAATCAAGAACAAGGCTGGACGGATTTGTAGTTATATATACTAG 1215 0.4222 MLSSFQFSDGRCINWSASGMCLAEIRQEKVSVRSVASSFNEIEHFNECESGISSCTKIAFFQYKQQSAILKVLEMKTGVIRKTFDGLSRVDMEIVTSTVNWPVIRWFGEDDKFFARIGTNVLSVYDTETFSPVAEFENVRNFSCSPANTILATFGIPLDGCDESPSIKLLEIPSKKVLWETMVVEAQNCQVFWQCKGDYVAFLLDKSSERLPGTYATILIFRIEISDAAIAITPVQFLGRELDSKIVAFSWEPKGHRFSVAQAGSNIAIDLYSLHGPLQSPLKLTSIPEVPASFIFWSPVGRFLVIVGLTDQSGHLTFYDADESEVLATQECMAMDVQWDPLGRNEDLVLFWRAALSNSRNEFITVLLASYSKILEPPKSPKPTDEKAAGSIKNKAGRICSYIY* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01643 404 Pfam Eukaryotic translation initiation factor eIF2A 185 344 IPR013979 -
Pte11g01643 404 Gene3D - 5 373 IPR015943 GO:0005515
Pte11g01643 404 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 12 344 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pte11g01643 404 SUPERFAMILY Tricorn protease domain 2 4 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01643 Pte-Chr11 35038662 35040629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01643 13 344 Eukaryotic Initiation Factors Gene Family AT5G25780 30.726 4.24e-50 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01643 K03253 - egr:104422645 207.223