Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01639 ATGAGGTTGGTAGCTGTTGCCGTCAACGGAAGTCTCGATGACTGTAAAGTCAGAGGAGGCAAAAGCAGCCTACGAGCCTTGAAATGGGCGGTGGCAAATCTTACAGATCAGGCAGATGGTCTTGTATTAATTCACGTTATGCCTAGAATCACTTCAATTCCAACCCCATCAGGAGAGCTTACTCCCATATCCAAAGTTGATGCCAATGTGTTAGCAGAGTATGTGCATGACGTCAAAATGAAATTTGAAGAAATTTTTAAGCCATTTAAGAAAGCATGCGATCACAGAACGATAGAAACTTTGCTGCTAGAAGATGATGATCCAGCATCTTCACTTCTTAGGTATATATCTGAAGCAGGGATTCAAATGTTGGTCATGGGCTCTACTTCCTCCAACTTCATTACCAGGAAGATAAAGGGACCAGGTGTACCTACAACTGTTCTCAGATGTGCTCCTAGCACTTGCGATATATATATAGTTGGAAGAGATGGAATCATCTCAAAATTGGCTGAATCCGCAACTTGTTACGACACCATCTCACGGGACAGCATTTCGACTGAAAGAAGTCATGGAGACAATCTCACTGATGCCGAAAGTCAAATATCTGCTCTTGATTCTTATTCTGCTGAACCTCAAATTCTTAGAACATCTCAAATGTCATCCTCGGCACCAGATTTTAGCCACATAGATTCAAAATCATCTCTTGATATGTATCCTCTTTTAAATGCTAGTTTAGATCTGGAAATAACTCGAGATTTGTCTGAAAATGATATTGATGTTATTAGTATTGATAGATGCAGTTCCATGGCCTCCAAAAACTCTGAGCAGTCAGTCACACAAGAGGAAGTGGCACAACTGCAGCTAGAATTACAGAATAGCATTGCTATGTACAGACGGATTTGTAAAGAGTTAGCTCGTGATCAAAACAAGGTCCTTCAACTTTCTTCTGAATGCCTTGAAGAAGTTAATAGAGTAAAAGCGGCTACAGAAAGAGAGGTAACTTTGAGAAGAATTGCAGTTGAAGAAAAGGCAAAACGTGTTGAAGCAATGAAGGAACTTGAGGAAGCAAAAAAGTTAATTTCTAAGGAGACCTACGAAAGGCAAATTGCAGAACTGAATGCGCTTAAGGAATCTATAGAAAAGCAGAGAATTGTTAATGAACTATTCTCACATGACAAGAGGTACAGAAAGTACTCAAGGGATGAAATCGAAGTGGCAACTAATTACTTCTCTGAAGCTAATATGATAGGTGAAGGAGGTTATGGAAAAGTTTACAGGTGCATCCTCGATCATACTCCAGTAGCTGTAAAGGTTATTCGGCAGGATGCAATGGAAAAGAGAGAAGAGTTTCTGAAAGAGGTTGAGATTCTGAGCCAGCTACACCATCCACACTTGGTTTTGCTGCTTGGAGCCTGTCCAGATATTGGTTGTCTTGTGTATGAGTACTTGGAAAATGGAAGCCTAGAAGATTATATTCTCCACAGAAATGGGAAACAACTGCTTCCTTGGTTTATCCGCTTCCGCATAGTATTTCAAGTGGCCTGTGGCCTGTCATTTTTGCACAACTCAAAGCCAGAGGCTATCGTTCATCGAGACCTCAAACCTGGGAACATCTTGTTAGACAAAAATTACGTGAGCAAACTATCAGATGTTGGGCTGGCTAAACTCCTTTCAGATGTTGCTCCAGACAACATTACAGAGTATAATGATACACTTGTAGCTGGTACTCTCTACTACATGGATCCTGAATACCAGAGAACTGGTACTATCCGGCCAAAATCTGATCTATATGCTTTGGGAATTGTTGCTCTTCAGTTGTTAACAGCTCGTCCTCCTCATGGACTAATCTTGGTTGTTGAAAATGCCCTTAGGAATGGCACCTTACCTGATATTCTAGACAGATCTATTAATTGGCCACCGACTCAGACACTGGAAATGGCTCAAATGGCTCTGCATTGCTCTCAGCTGAGATGCAGGGATAGACCAGATCTTGATACCGAAGTTCTGCCTGTTCTGAAAAGACTTTATGATACTGAAAAAGCAGGTCTGAAGTTACATAACAATAGTATTAATATGCAAACGCCAAGTCAGTATTATTGTCCAATTCTCCAGGAAATAATGGATGATCCACATATAGCAGCTGACGGGTTTACATATGAGTACAGAGCAATCAAAGCATGGCTTGGCAAGCACAATGTATCACCTGTGACAAAGTGTAGACTTCAGCATTCTACATTAACTCAAAATCATACATTGCGTATTGCCATTCAAGAGTGGAAATCACATCTGCACTCCTCAAGCACCAGAAGTGCAAAAGATGAATTGAAAAATGAATAA 2337 0.4069 MRLVAVAVNGSLDDCKVRGGKSSLRALKWAVANLTDQADGLVLIHVMPRITSIPTPSGELTPISKVDANVLAEYVHDVKMKFEEIFKPFKKACDHRTIETLLLEDDDPASSLLRYISEAGIQMLVMGSTSSNFITRKIKGPGVPTTVLRCAPSTCDIYIVGRDGIISKLAESATCYDTISRDSISTERSHGDNLTDAESQISALDSYSAEPQILRTSQMSSSAPDFSHIDSKSSLDMYPLLNASLDLEITRDLSENDIDVISIDRCSSMASKNSEQSVTQEEVAQLQLELQNSIAMYRRICKELARDQNKVLQLSSECLEEVNRVKAATEREVTLRRIAVEEKAKRVEAMKELEEAKKLISKETYERQIAELNALKESIEKQRIVNELFSHDKRYRKYSRDEIEVATNYFSEANMIGEGGYGKVYRCILDHTPVAVKVIRQDAMEKREEFLKEVEILSQLHHPHLVLLLGACPDIGCLVYEYLENGSLEDYILHRNGKQLLPWFIRFRIVFQVACGLSFLHNSKPEAIVHRDLKPGNILLDKNYVSKLSDVGLAKLLSDVAPDNITEYNDTLVAGTLYYMDPEYQRTGTIRPKSDLYALGIVALQLLTARPPHGLILVVENALRNGTLPDILDRSINWPPTQTLEMAQMALHCSQLRCRDRPDLDTEVLPVLKRLYDTEKAGLKLHNNSINMQTPSQYYCPILQEIMDDPHIAADGFTYEYRAIKAWLGKHNVSPVTKCRLQHSTLTQNHTLRIAIQEWKSHLHSSSTRSAKDELKNE* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01639 778 Pfam Universal stress protein family 19 149 IPR006016 -
Pte11g01639 778 Coils Coil 362 382 - -
Pte11g01639 778 ProSiteProfiles U-box domain profile. 693 766 IPR003613 GO:0004842|GO:0016567
Pte11g01639 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Pte11g01639 778 CDD RING-Ubox_WDSUB1-like 695 749 - -
Pte11g01639 778 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 696 768 IPR013083 -
Pte11g01639 778 Coils Coil 339 359 - -
Pte11g01639 778 CDD STK_N 3 160 - -
Pte11g01639 778 Gene3D Phosphorylase Kinase; domain 1 389 482 - -
Pte11g01639 778 SUPERFAMILY RING/U-box 689 761 - -
Pte11g01639 778 SMART serkin_6 410 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01639 778 Gene3D Transferase(Phosphotransferase) domain 1 483 695 - -
Pte11g01639 778 Gene3D HUPs 1 163 IPR014729 -
Pte11g01639 778 ProSiteProfiles Protein kinase domain profile. 410 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01639 778 Coils Coil 440 460 - -
Pte11g01639 778 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 382 482 - -
Pte11g01639 778 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 4 161 - -
Pte11g01639 778 Pfam U-box domain 695 761 IPR003613 GO:0004842|GO:0016567
Pte11g01639 778 SUPERFAMILY Protein kinase-like (PK-like) 392 665 IPR011009 -
Pte11g01639 778 FunFam Os07g0541700 protein 483 576 - -
Pte11g01639 778 Pfam Protein kinase domain 411 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01639 778 ProSitePatterns Protein kinases ATP-binding region signature. 416 437 IPR017441 GO:0005524
Pte11g01639 778 SMART Ubox_2 697 759 IPR003613 GO:0004842|GO:0016567
Pte11g01639 778 PANTHER OS02G0152300 PROTEIN 5 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01639 Pte-Chr11 34999493 35003508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01639 4 761 Plant U-box Gene Family AT5G57035 51.876 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte11g01639 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01639 - - qsa:O6P43_002723 970.304