Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01620 ATGGGTTGTTTCTCGTGTTTTGATTCCAAGGAGGAACAGACTCTCAATCCCAATAAAGAGACTGATGATCAGAAGCAAATCCAACCCACGGTTCCTCCTAAAATTTCTAGATTGCATTCTGGAGTGGACAGGCTTAGATCAAAGAGCATTGGAGGCTCCAAAAGGGAGCATCCCGGTCATAAAGATGGACCTGGTGTGCAAATTGCAGCTCAGACTTTTACCTTCCGTGAGCTGGGAGCTGCAACAAAAAATTTTAGACAAGAATCATTTCTGGGCGAAGGGGGTTTTGGTCGGGTGTACAGAGGGCGCCTGGAAAGCACTGGTCAAGTCGTTGCTGTTAAACAATTAGATAGAAATGGTCTTCAGGGTAACAGAGAGTTTTTAGTGGAGGTCCTCATGCTCAGTCTTCTACATCACCCTAACCTTGTGAGCCTGATTGGCTATTGTGCTGATGGGGACCAACGCCTGCTTGTCTATGAATATATGCCCCTTGGGTCATTAGAAGATCACCTTCATGATCTTCCACCTGATAAAGAACCATTAGATTGGAACATAAGAATGAAAATAGCTGCTGGTGCAGCAAAAGGTTTGGAGTATTTGCATGACAAAGCTAACCCTCCAGTTATATATAGGGATTTCAAATCTTCCAACATATTACTAGACGAAGGGTTTCATCCAAAGCTGTCTGATTTCGGTCTCGCAAAGCTTGGTCCTGTAGGAGATAAATCGCATGTTTCCACGAGGGTGATGGGTACTTACGGTTATTGCGCTCCTGAGTATGCTATGACTGGACAATTGACAGTGAAATCTGACGTATATAGTTTTGGGGTAGTCTTTTTGGAGCTGATCACCGGTAGGAAAGCCATTGATAGCACCCAACCCCATGGAGAGCAAAACCTCGTGACATGGGCACGACCTCTATTCAACGACCGTAGGAAGTTCTCGAAGTTAGCGGATCCAAGGTTGCAGGGGAAATATCCCATGCGGGGTCTCTACCAAGCTCTTGCAGTGGCATCCATGTGCATCCAAGAGCAAGCTGCCACCCGCCCTCTCATCGGGGATGTGGTCACTGCTCTCTCTTATCTTGCCAACCAGTCTTATGATCCAAATGCAGCAGGGCATCCATATAGGGGATTTGATGAGAAGCGAAGCAGAGATGAGAGAGTGGGAAGAATATTGAGGAATGAGGAAGGTGGAGGATCAGGACGGAGGTGGGACTTGGATGGATCTGAGAAAGAGGACTCTCCACGAGAATCTGCCAGAATATTGAACAGGGATTTGGACAGAGAGCGTGCAGTGGCTGAAGCGAAGATGTGGGGAGAGAACTGGAGAGAGAAAAGGCGACAGAGTGCACAAGGTAGTAGTTTTGATGGCACTGCTGTTTAG 1386 0.4697 MGCFSCFDSKEEQTLNPNKETDDQKQIQPTVPPKISRLHSGVDRLRSKSIGGSKREHPGHKDGPGVQIAAQTFTFRELGAATKNFRQESFLGEGGFGRVYRGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKEPLDWNIRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGKYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQSYDPNAAGHPYRGFDEKRSRDERVGRILRNEEGGGSGRRWDLDGSEKEDSPRESARILNRDLDRERAVAEAKMWGENWREKRRQSAQGSSFDGTAV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01620 461 MobiDBLite consensus disorder prediction 438 461 - -
Pte11g01620 461 Gene3D Phosphorylase Kinase; domain 1 60 161 - -
Pte11g01620 461 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Pte11g01620 461 Pfam Protein kinase domain 86 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01620 461 FunFam Serine/threonine-protein kinase PBS1 162 376 - -
Pte11g01620 461 MobiDBLite consensus disorder prediction 375 426 - -
Pte11g01620 461 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01620 461 PANTHER OS07G0668900 PROTEIN 3 370 - -
Pte11g01620 461 CDD STKc_IRAK 91 359 - -
Pte11g01620 461 MobiDBLite consensus disorder prediction 1 42 - -
Pte11g01620 461 MobiDBLite consensus disorder prediction 372 426 - -
Pte11g01620 461 Gene3D Transferase(Phosphotransferase) domain 1 162 374 - -
Pte11g01620 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pte11g01620 461 SUPERFAMILY Protein kinase-like (PK-like) 69 357 IPR011009 -
Pte11g01620 461 FunFam Serine/threonine-protein kinase PBS1 59 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01620 Pte-Chr11 34861056 34866064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01620 1 362 Glycoside Hydrolase AT3G07070 64.088 5.21e-168 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte11g01620 Pkinase 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01620 K13430 - tcc:18608901 828.935