Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01612 ATGAGTTATGACTACAGTAATTATTCTTCTTATTATTGTGATCAATCTTGCTTGGGATCTGAGTTTTTAGTAGTATCTCCACATGGTCAAATGGCTGATCATCACCACCAGAAGCAGCAGCTCGAATCAAGGACTAACAGCATTAACAATGAAGCTGCCTCGACGTCCTCAAAGGATCATAACGCCGATAGAGCAGAGCCGGACGATGATGAGGGCTGGCTTCAATTAACCATAGGTTCTCATACTCATGGCTGTGAACAGCAACTTACTTCTGCGTCAGACTCCCAAAATATTAACAGACATCTTAATGATGACAAGGACGACCTTGACCAAGCTCAGCAGCTCTACACAGCTTACCCGACGACTATGTTGTCTTCTACTTCTACAGATTCTGGACTGGTAGAGCTAGACTTGATATCCTCTGGTCCTGGTGGAAGCCATTCTCTACAGTTAGTCAAGCCCCCCTTTTTTCATCTCCGACCAATCTTTCATCAGATTCCAGAAATACATGGTCCACCGCGGCCAATAATCAATTATGATTACACAAGAGGAAGAGAAGGAGGGTCCGCAGCAGCCTCAGCCTCCAGTAGTTTTGGTTTGCCAACGTCTCCGTACACCCAACAAGCACCGCGAAGTGGGTCGTCAAGCGTCATTCTTCCTCAAGAGATTAACTGGACACGGACGTTGTGGCCTTCTGTTGCCTCGCCCCAATATTCTATGGGGATGATGCCTTCTTCCTTGTCATCTTCTTCCTCGTCATCAGCAGCAGCTTCGTTTTCTTCTTTGAGGCCTCTTGGCTCCTTGTTCGCGAGACCCTTACAGTTCCAGTTCCATGCGCATGCAGCTGGCCCAAGTTCGGATATAATTAGGGTGGTTGATCCTCCTCGAAGACCTCATTCCGGATTATGGTTCATTCTACAGGCCTCTCAAAATCAAGTCAAAGAACCGTTCTTGCCTCAAATTTCCAAGAGCTTTCTGCGTATCAAGGATGGAAGGATGACAGTCCGATTGGTAATGAAGTACCTGGTTAACAAACTTAAACTGGATAGCGAATCTGAGATAGAGATTACATGCAGAGGACAACAGCTTGCACCTTTCTTAACGCTGCAGCATGTGAGAGACAACATATGGAGTCCGAGAGATGCAGTCACTTTGCTTCCAGATTCTACATCGACTGATCATGTCATGATGCTTCACTACGGCAGGAGTGCTTAG 1215 0.4634 MSYDYSNYSSYYCDQSCLGSEFLVVSPHGQMADHHHQKQQLESRTNSINNEAASTSSKDHNADRAEPDDDEGWLQLTIGSHTHGCEQQLTSASDSQNINRHLNDDKDDLDQAQQLYTAYPTTMLSSTSTDSGLVELDLISSGPGGSHSLQLVKPPFFHLRPIFHQIPEIHGPPRPIINYDYTRGREGGSAAASASSSFGLPTSPYTQQAPRSGSSSVILPQEINWTRTLWPSVASPQYSMGMMPSSLSSSSSSSAAASFSSLRPLGSLFARPLQFQFHAHAAGPSSDIIRVVDPPRRPHSGLWFILQASQNQVKEPFLPQISKSFLRIKDGRMTVRLVMKYLVNKLKLDSESEIEITCRGQQLAPFLTLQHVRDNIWSPRDAVTLLPDSTSTDHVMMLHYGRSA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01612 404 MobiDBLite consensus disorder prediction 189 214 - -
Pte11g01612 404 PANTHER RING FINGER PROTEIN 17 403 IPR044171 GO:0007275
Pte11g01612 404 Gene3D - 297 400 - -
Pte11g01612 404 MobiDBLite consensus disorder prediction 188 214 - -
Pte11g01612 404 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01612 Pte-Chr11 34739575 34748441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01612 315 400 C3H Transcription Factor Family AT3G23060 35.484 7.19e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01612 - - pop:7482812 313.923