Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01609 ATGTGCCACAACTGGGATGGTATTCGTTCTAATGATAAAAAGGCTGTATACAGTGATATTGTTTCTTACGAAGTTGATGTGAATGCTCCATATGAGAAAACATGCGGCTCCTTAAGCCTTGCCAAGTATGGTGCAAATGTAAATGCAACTGATTTGACAGGCCACACACCTCTTCATCATTGTCTTTTAAAAGGCAAAACAACCTTGGCAAGGTTACTTGTCTCAAGGGGAGCAAATCTTCGTGCTATTGATGAAGAAGAAAAGACTGCGTGCAAGCCGGCGATAGAGTCGAACCTCGATGTTAGAGAGATACTTGCCATATCAGATTCCAAAGGATGA 339 0.4189 MCHNWDGIRSNDKKAVYSDIVSYEVDVNAPYEKTCGSLSLAKYGANVNATDLTGHTPLHHCLLKGKTTLARLLVSRGANLRAIDEEEKTACKPAIESNLDVREILAISDSKG* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01609 112 ProSiteProfiles Ankyrin repeat region circular profile. 53 85 - -
Pte11g01609 112 PANTHER CENTAURIN/ARF 40 109 IPR045258 GO:0005096
Pte11g01609 112 SUPERFAMILY Ankyrin repeat 15 98 IPR036770 -
Pte11g01609 112 SMART ANK_2a 53 82 IPR002110 GO:0005515
Pte11g01609 112 Pfam Ankyrin repeat 54 84 IPR002110 GO:0005515
Pte11g01609 112 ProSiteProfiles Ankyrin repeat profile. 53 85 IPR002110 GO:0005515
Pte11g01609 112 Gene3D - 8 110 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01609 Pte-Chr11 34706071 34706756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01609 36 111 MAP Kinase Kinase Kinase AT2G31800 36.364 5.13e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01609 K12489 - han:110917344 90.8929