Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01588 ATGTTTCATTTGTCAAAAATGGCTTCTATGTTTCTCAATCTTGTGGCAGCATGCTACACAGTACTATTGCTTCTAGGACCAGAATTATCCTATGCTAAGTTGAGTCCAACATTTTATAGCAACTCGTGTTCTGACGTATCAAGTATCGTACGTCGTGTTATTCATGATGCTCTCAAAACCGATGCACGAATCGGTGGAAGCCTCATCAGGCTTCATTTTCACGACTGCTTCGTTCAGGGTTGTGATGCATCACTTTTGTTGAACAACACTGCCTCAATAGTGAGTGAGCAACAAGCTATTCCAAACAATAATTCAATCAGGGGTTTAAATGTTGTGAATGACATTAAGGCTGCAGTGGAGAAGGCTTGTCCAGGGACTGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTCAACAATCTGTTTCCTTGGCAGGAGGGCCATCATGGGCTGTTCCACTGGGCAGAAGAGATAGCGCAAGTGCAAACCGCAGCCTCGCCAACCAAAATCTTCCAGGTCCCTTCTCCACTTTAGAACACCTCAAGGACAGGTTTGTCAATGTAGGCCTCGACACAACTGATCTAGTTGCATTATCAGGTGCTCACACATTTGGAAGAGCTAAATGTGGAACCTTCAGCAGCCGCTTATACAATTTTAGCAGCACTGGCATTCCCGACCCAATTCTCAATACAACATACTTGAGAAGACTGAGAAATATATGTCCACAAAATGGGGCTGACATTAATCTCACCAACTTGGATTTCTCTACTCCTAACAAATTTGATAAGAACTACTATTCTAATCTCAAAATCCAGAAAGGTCTTCTACACAGTGACCAAGTGCTGTTCTCAACAAGTGGTGCAGACACCATTTCCATCGTCAACACATTCAGCAAAAACCAAAAGGCTTTCTTTGACAGCTTTGCTACTTCCATGATTAACATGGGTAACATTAGCCCCTTGACAGGGTCACAAGGACAGATAAGACAGCACTGCAACTTTGTCAATGGACAATCTTCATTGGAGGAGTCTTTTGGAATCTCTAACCCTTTGGTGAGCTCAATGTAG 1065 0.43 MFHLSKMASMFLNLVAACYTVLLLLGPELSYAKLSPTFYSNSCSDVSSIVRRVIHDALKTDARIGGSLIRLHFHDCFVQGCDASLLLNNTASIVSEQQAIPNNNSIRGLNVVNDIKAAVEKACPGTVSCADILALAAQQSVSLAGGPSWAVPLGRRDSASANRSLANQNLPGPFSTLEHLKDRFVNVGLDTTDLVALSGAHTFGRAKCGTFSSRLYNFSSTGIPDPILNTTYLRRLRNICPQNGADINLTNLDFSTPNKFDKNYYSNLKIQKGLLHSDQVLFSTSGADTISIVNTFSKNQKAFFDSFATSMINMGNISPLTGSQGQIRQHCNFVNGQSSLEESFGISNPLVSSM* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01588 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Pte11g01588 354 Gene3D Peroxidase, domain 2 171 314 - -
Pte11g01588 354 Pfam Peroxidase 50 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Pte11g01588 354 FunFam Peroxidase 171 314 - -
Pte11g01588 354 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pte11g01588 354 SUPERFAMILY Heme-dependent peroxidases 34 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 CDD secretory_peroxidase 33 334 IPR033905 GO:0004601|GO:0042744
Pte11g01588 354 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 PANTHER PEROXIDASE 72-RELATED 31 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 FunFam Peroxidase 37 179 - -
Pte11g01588 354 ProSiteProfiles Plant heme peroxidase family profile. 33 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte11g01588 354 Gene3D - 38 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01588 Pte-Chr11 34472347 34474436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01588 30 343 Peroxidase AT5G06730 62.102 5.41e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01588 K00430 - gmx:112997600 426.402