Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01578 ATGCAGCTAAACCATATTTGCTTTGTTCTGCCAACAGATTTTGATGAAACTGAGGTATATGATCAACAAGAAAAGCACAAATCTTCAACACACAAAAAGGTCAATAAACATTCTCTTCATGATTATGGGGGTCATGTTCGTGAATTCATACGTAACATTTTCTTCAAAGTCTATGATTCGAAATTGTTGAGCTTTTGTCACTGCAACTGCTATCCACAAAGGACATACAACTCAGGTGTGTTTCATGACATGGACGGAGTGCAAGTTCTGGACAAGGTTGGCAGAGAGAATCCAAGAATATTTAGCTTTGCGGAGCTTTTCATAGGGTCCAAAGGATTCAGTGAGGATGAGATTCTTGGCAGTGGAGGATTTGGAGAAGTCTACAGAGCAGTTTTACCAAGTGATGGAACTGTAGTTGCTGTGAAATGTTTGATAGAGAAAGGAAACCAATTTGAGAAGACCTTTGCTGCTGAATTGGTAGCTGTGGCTCATCTTCGCCATAAGAACCTTGTCAGGTTGAGGGGATGGTGTGTTCACGAAGATCAGCTGTATTTGGTTTATGACTATATGCCGAATCGTAGCCTGGACAAATTACTCTTCAAAAGGCCTGAGAATCCGGCAGCTGAGCCTCTTGATTGGTCAAGGCGTTGGAAAATAGTCAAAGGCTTGGCATCTGCACTGCACTATCTTCATGAACAATTGGAAACACAGATCATCCACCGTGATGTGAAAGCCAGCAATGTGATGCTTGACTCACACTACAATGCCAGGCTAGGTGACTTTGGCTTGGCAAGGTGGCTGGAACATGAGCTTGAGTATCAGACATCATCAAGAAGAAATCCCCAGTTCAGATTGGCAGACACCACCAGAATTGGTGGCACAATTGGTTACTTGCCACCTGAGAGTTTCCAGAAAAAAAGCATTGCTACTTCGAAGTCTGACGTTTTCAGCTTTGGGATTGTAGTGTTAGAGGTTGTGTCAGGAAGAAGGGCAATAGACCTGACATACCCAGATGATCAAATCATCTTGCTTGATTGGATGAGAAGGCTTTCTGATGAGAAGAAGCTTCTGCAAGCTGTGGACACCAGGCTTGTTGATTGGTCATACAAGCTTGCTGATATGGAGCATCTGATTCATATAGCATTGCTATGCACACTTCAAACTCCACAATCAAGGCCAACAATGAAATGGGTTCTAGAATCACTTTCTGACAACTTCTCGAGAAAATTGCCAGCTCTGCCTTCATTTCATTCCCACCCAGTCTATATCTCTTTATCTCAAACAAGCACTAGTGGAAGCTACAGAAATTCAACAAGGTCCACCACAGAAAGCATTTCATCAAACTACTTGACTGCAAATGCAGAAACCAAGTACGTGACTGCTGAAGGTAAAAACAATGACGTAGCCTCTTCAAAGAGCAGCATCCATCAGCAATCTAAGAGCTTCTTTCCAGTTGAAGCACCAAGAGAAATATCATTCAAGGAAATCATTTCTGCAACTAATAACTTCTCAGATTCACAAAGGGTAGCTGAGCTTGATTTTGGAACTGCTTACCATGGCATCCTTGACCATCGTCACCATGTATTGATAAAGCGGTTGGGAATGAAGACATGTCCTGCACTAAGAGCACGATTTTCAAATGAACTTGAAAACCTGGGGAGGCTTCGTCATAGAAATTTAATACAGCTCCGCGGTTGGTGCACTGAACAAGGGGAAATGCTTGTGGTCTATGACTTCTCCGCAAATCGACTTCTAAGCCATCTGCTATTCCACCGTGACCATAGATTCCACATTTCCATCCTGAAATGGCAACAGAGATACAACATAATCAAATCACTTGCTTCTGCAATTCTGTATCTTCACGAGGAATGGGATGAGCAAGTCATCCACAGAAATATCACATCTTCAGCTGTCATCCTTGAACCTGACATGAACCCAAGGCTCAGTTGTTTCGCCCTCGCTGAATTCTTGACCAGACATGAGCATGGCCATCATGTAGTTCTCGACACCAAGAAATCAGTTCGCGGAATTTTTGGCTACATGTCACCGGAATACATAGAAACCGGTGAAGCGGCCCCTATGGCAGACATCTACAGCTTTGGAGTGGTGATACTTGAAATTGTGAGTGGACAAATGGCAGTCGATTTGCGAAGACCTGAAGGTTTGTTGGTGAAGAGGGTACTTGAATTTGAAGTAAAGAAAAGGGCTTTGGAGGACATTGCAGATATGAAGCTCAATGGAGAGTACAATAGTGAAGAGTTTCTGAGAGTGGTGAAACTAGGCCTAGCATGTACAAGGTCTGACCCAGAATTAAGACCAAGCATAAGGCAGATTGTGAGTGTACTTGATGGGAATGACAGAGGTCTTATGGAAGAAAGGCACAAAGAAACAATGGAGGATTGGAAAGAAAGAAATGCTTCTTCTTTGTCACTGCTGAAGAGAATCCAAGCTCTGGGGATACAGTGA 2466 0.4303 MQLNHICFVLPTDFDETEVYDQQEKHKSSTHKKVNKHSLHDYGGHVREFIRNIFFKVYDSKLLSFCHCNCYPQRTYNSGVFHDMDGVQVLDKVGRENPRIFSFAELFIGSKGFSEDEILGSGGFGEVYRAVLPSDGTVVAVKCLIEKGNQFEKTFAAELVAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNRSLDKLLFKRPENPAAEPLDWSRRWKIVKGLASALHYLHEQLETQIIHRDVKASNVMLDSHYNARLGDFGLARWLEHELEYQTSSRRNPQFRLADTTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVVSGRRAIDLTYPDDQIILLDWMRRLSDEKKLLQAVDTRLVDWSYKLADMEHLIHIALLCTLQTPQSRPTMKWVLESLSDNFSRKLPALPSFHSHPVYISLSQTSTSGSYRNSTRSTTESISSNYLTANAETKYVTAEGKNNDVASSKSSIHQQSKSFFPVEAPREISFKEIISATNNFSDSQRVAELDFGTAYHGILDHRHHVLIKRLGMKTCPALRARFSNELENLGRLRHRNLIQLRGWCTEQGEMLVVYDFSANRLLSHLLFHRDHRFHISILKWQQRYNIIKSLASAILYLHEEWDEQVIHRNITSSAVILEPDMNPRLSCFALAEFLTRHEHGHHVVLDTKKSVRGIFGYMSPEYIETGEAAPMADIYSFGVVILEIVSGQMAVDLRRPEGLLVKRVLEFEVKKRALEDIADMKLNGEYNSEEFLRVVKLGLACTRSDPELRPSIRQIVSVLDGNDRGLMEERHKETMEDWKERNASSLSLLKRIQALGIQ* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01578 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Pte11g01578 821 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Pte11g01578 821 Pfam Protein kinase domain 114 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01578 821 PANTHER - 91 411 - -
Pte11g01578 821 SUPERFAMILY Protein kinase-like (PK-like) 477 782 IPR011009 -
Pte11g01578 821 Gene3D Transferase(Phosphotransferase) domain 1 581 808 - -
Pte11g01578 821 FunFam Receptor like protein kinase S.2 190 408 - -
Pte11g01578 821 FunFam Receptor like protein kinase S.2 581 806 - -
Pte11g01578 821 SUPERFAMILY Protein kinase-like (PK-like) 97 418 IPR011009 -
Pte11g01578 821 CDD STKc_IRAK 514 784 - -
Pte11g01578 821 Gene3D Phosphorylase Kinase; domain 1 463 579 - -
Pte11g01578 821 Gene3D Phosphorylase Kinase; domain 1 83 189 - -
Pte11g01578 821 Gene3D Transferase(Phosphotransferase) domain 1 190 410 - -
Pte11g01578 821 ProSiteProfiles Protein kinase domain profile. 113 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01578 821 FunFam Receptor like protein kinase S.2 87 189 - -
Pte11g01578 821 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01578 821 Pfam Protein tyrosine and serine/threonine kinase 509 782 IPR001245 GO:0004672|GO:0006468
Pte11g01578 821 SMART serkin_6 113 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01578 Pte-Chr11 34314074 34316875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01578 493 785 Receptor kinase-like Gene Family AT3G53810 37.458 1.72e-52 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pte11g01578 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01578 - - qsu:112022817 1207.97