Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01568 ATGTTTGGTCATCAGTATAGCTATGGAGCCTTGCTGCTCCTGAAGAGGAAGCTGAAATCTCTTGCTACTGTTACGCCATTCACAATCAGAACCTCATCACAGCAGCCGCAGCACGCTGCACACAGATTCTGGTACTGTCAAATCAATCGTCCAGTAAAGGAAGAGTCTTTTGCGGTGTCCTATCTCATAGAGAATTGTGGGTTCTCGCCAGAAAGAGCTGTCTCAACTGCCAAGCGTGTTCGTTTTGAGAAATCACAGAAACCTGACTCGTGCTTCACTTTCTTTAGGAGCTATGGTTTCTCTGATCCTCAAATCTGCACTATCTTCAGAAGGGTACCACCTGTGCTTTTATTTGATCCCCAAAAGAAAATTCTACCCAAGTTGGAGTTTTTCGAGTCCAAAGGTTTTTCGAGATCTGACATTGTCTATATAGTCTCATACGCTCCGACGTTCTTAGAGAGAAGCTTGGAGAAATTTATTGTTCCTTCTTTTGATTTGCTTGTGGATTTATGTCACTCTGATGAGAAGAAAGCTCTCAAAACTGTAAAAATCCGTGCACATGTTGTTTTCACAACTCAATTTTGGAAGAATGTGCAATTTTTGATCGATACTGGGGTTACAAAGTCAAATGTCGTTGTATTGCTTCAGTTGTGTCCAAATTTGTTGAGTTTTACCTTGAATAACTTTAAGAAGGCTGTGGAACAAGTAAAGCAGTTGGGGTTTAAAACATCGAGAACAAGCTTCGTTATGGCGTTGATTTCCAAAAAAGGGATGAGCAAATCCAAGTGGGATAATAAGGCAGAGATTTACAAGAAGTGGGGTTGGTCAGCAGAAGTGTTCGTTTCTGCGTTTAAGGTCAATCCTCAGTTGATGCGAATCTCTGCTAAAAAAATTGATACAGTGATGGATTATTGGGTAAACCAATTGGGTTGGGACGCTTTGATTCTTTCCAAAGGTTCAGCAGTTATAGGTTGCAGTTTGGAGAGGAGAATCAAACCAAGGGCTTCTATTCTGCAGTATCTTTTGTCGAAAAATTTGATTGATAAGAAGGTTGGCTTGATTTCGCCATTTGTTGTTAATGAAAAGTTGTTCCTGCAGAGGTATGTGGAGTGTTACGGGGAAGAAACTCCTCAATTACTGAAGCTGTACAAAGAAAATTTGAATATTTCACATTAA 1176 0.4031 MFGHQYSYGALLLLKRKLKSLATVTPFTIRTSSQQPQHAAHRFWYCQINRPVKEESFAVSYLIENCGFSPERAVSTAKRVRFEKSQKPDSCFTFFRSYGFSDPQICTIFRRVPPVLLFDPQKKILPKLEFFESKGFSRSDIVYIVSYAPTFLERSLEKFIVPSFDLLVDLCHSDEKKALKTVKIRAHVVFTTQFWKNVQFLIDTGVTKSNVVVLLQLCPNLLSFTLNNFKKAVEQVKQLGFKTSRTSFVMALISKKGMSKSKWDNKAEIYKKWGWSAEVFVSAFKVNPQLMRISAKKIDTVMDYWVNQLGWDALILSKGSAVIGCSLERRIKPRASILQYLLSKNLIDKKVGLISPFVVNEKLFLQRYVECYGEETPQLLKLYKENLNISH* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01568 391 PANTHER CGI-12 PROTEIN-RELATED 55 373 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 Gene3D Transcription termination factor 3, mitochondrial 70 190 IPR038538 -
Pte11g01568 391 Gene3D Transcription termination factor 3, mitochondrial 191 382 IPR038538 -
Pte11g01568 391 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 FunFam Mitochondrial transcription termination factor-like 156 376 - -
Pte11g01568 391 Pfam mTERF 94 255 IPR003690 GO:0003690|GO:0006355
Pte11g01568 391 Pfam mTERF 193 364 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01568 Pte-Chr11 34189771 34191540 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte11g01568 mTERF 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01568 K15031 - qsa:O6P43_021713 285.804