Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01545 ATGTCCAATGAGGTTCCTGGTACTCCAAGACAGCAATGGTATGAAAGAGCCAATATTGTTGGGCCAAGAGACAGATTTCCTGCAGATGGGGCTCTATACAATATATGTACACAGACAGGTGAAGAATTCTCAGTTGAGTTTTTGCGAGATCGTGTAGTTAGTCCAAGGACCGCCCCAGTCATGAGAGATGTATATCACCAGCAGGCAAAAAGATTTGGTCATAACCGTCACGTGCCTTATGAGGATCTCAATGGTGTTCTTGGTTTGCAGCGAATGAGTTCTGAAAATGGTTCCGATGTCATAGACTTTGTTCCTGGGATAGGATATGTTGCTGAAGCAGAAAAAAGATCTGATCCCGTTAACATAATCGGATATCAGAGGGAACGTGGTGGTTCAAGTGGTCAACTATCAAGTAAATTTGCAGATGATGGTTGGTTCTCTCCTGGAAGAGGTAGTCCACCTATTCATACGGTTGAGTTGCCTCGGTCATGCCAATGTCCAGGAAGAGTTCTATCTTCATCACCATCAGAATGTTCTTCATCTGGGAAGATAAAGTTTCTCTGCAGCTTTGGGGGAAAAATATTACCAAGGCCACATGATGGAAAACTTAGATATGTGGGAGGAGAGACAAGAATTCTATCCCTTAGTAGAAGCATCAGCTTTGAGGATCTTACAAGGAAAACATGTGCAATATGGAACCATCATCATACCATTAAGTACCAGCTTCCTGGCGAGGATCTTGATGCTCTGATTTCTGTTTGTTCTAATGAAGATCTTAATCTCATGATAGAAGAATATCAAGAGCTGGAAAGAACTGAAGGCTCTCAGCGACTACGTATTTTTCTCATATCTACAAGTGAACCAGGGAGCCCAGCTTCTATTGAACATAGAGTCAGTCAGCCAATCGATGCAGATCTTCAGTATGTTGTTGCTGTTAATGGCATGCTATCAAGTCCAAGAAAGAGCTCCTGTGGACATAGTTTGACAAGCCAAACAAGCCAGTTTGGGAATGCTTCAGATTGCAGTCCATCTTTCGGGAGAGAGTCTCCAACTGCAGCATATTTTCCTCACATGTCATCACCATTTCAGTTGTCTGGAAAGTCATTTAATCAGCCGCCACCTTTTTCTCCTGTATCTATTCAGCAGAGAGATTCTAAGAACATTACTTCACCCTTGTATGTTAACCAATCACCCCATGATTGCAACAAAAGTTCTTACCCTATTGTATTGGAAAATGTTTCAAATGAAAATTTATCATTGATGGAAAATACCAAAAGCATCGATACAGTTGGTCATTTCAACATTAACAATCTTACTCAAGGGACTTCTTTCATGAATTACCATCCCTCTAACCCTTACTTCGCAGAGTTAGACCAACACAACCAACCCTTTGACATGTCTTATCGAAATAGGAGCCTCAGCAGTGAAGTTACATCTTCTGCGTGTGGCCAATTTGATTTGATTAGCGAGAGTTCTATAACAAAAGATTGGCCTTTTCATTCTGACATTCCAGAAGAACAATCAATTTTACTCTCGGAATCTAGTGACAGAGATAAATTTTGCTCAAAAATGGAACGATCACTCGCTGACTCATTATGGAAAGAGAATGATGAGAGGTCTAGCTCTCATGGTAATGGAAAGGGACTCACTGAATCTTCATTGAACATTTGGAGACCAAAATCACCACCATCAACAATGTCAAGTACTTCACCGGATTGGTTATTGCAATTTCTACAGACAGCCGATGTAAAAGCTCACGAGGACTTGCATGAGAATCTGCCTACTTGTATAACTACTGACAACCGCAAAGGTGAATTTCATCAAGATGGAGGAAACATGAACTTGACAGATAAGAAGAAGCACTGGTCTGATGAATCAGGTGGCAACTTCAGAAATCTTTTGGAAGAAATCAATGATGTGCAAAACAATTACTTACCATCAGATATGCATCCCTTGTTCACAGAGATAGAAAGACCTGAGCGCAAAGTTTCTATCCCACTGGAGTTTCCTGAAGAATCCCCAAGAATCCTGATGGAACAGTCACATTGTTTCCAATTGGAGATGGGAAATTCTGATATTACTATCAAGAGGCAAAACTCTATGGAGGATACCGGGAATGGTAGGTCTGAGATAGCGAGCAGTCACCAATTTTCTCCGAGAAGAACTGATTTTCGGCCTGTTGCATTCAACAGCAGCCAAGAGCAATTGTTGCCTGTTTCTGAAGCTGTAAGTTATGCAACAGAAAGAGAAGACAGTAACAGAAATGAGAAGACATCAACATATGGAAAATCTTATGATGCCAATGGATGTGATATCCTTTGCATGCGATCTCCAGCAATCGAGCCACGTCAGGAGAATGATATTACTTCTACTGTTCCTTCATCCTTAAAAATCATCTCTCGTGACGATTATGATGTTGATACTGAGCCTCCATATTCGGAGCAAGTGGACATAGATTGCCTAACTGCAAATTTGGAAAGTGATTATATTTGTAAAAATCAGGCTGCAAATGGTACTGGAAAGGAAATCGATAGGCCTTTTGGTGACTCAGAACTAGTTGAAATAGAAGCAGGAATCTACGGCTTGCAGACTATAAAGAATGCTGATCTTGAGGAACTGCAAGAACTGGGATCTGGAACTTTTGGCACTGTTTACCATGGAAAATGGAGGGGAACAGATGTTGCTATTAAGAGAATAAAAAGTAGTTGTTTTTCAGGAAAATCATCTGAGCAAGAGCGCTTGGTTAAAGATTTCTGGAGAGAGGCAAGACTACTGTCAACTCTTCACCATCCAAATGTGGTAGCTTTTTATGGAATTGTTCCAGATGGTCCTGGAGGAACATTGGCAACTGTAGCAGAATATATGGTGAATGGATCACTAAGGACTGTTCTGTTAACGAAGAAAGTAGTGCTTGACCGAAGGAAAAGGCTTATGATTGCAATGGATGCAGCTTTCGGCATGGAGTATTTGCATATGAAAAATATCGTTCACTTTGATTTGAAATGTGACAATTTGCTAGTCAATTTGAGGGACGCTGAGAGACCAATATGCAAGGTTGGAGATTTTGATCTGTCAAAAATTAAACATAACACACTTGTCTCTGGTGGTGTAAGAGGAACGCTGCCTTGGATGGCACCTGAGTTATTGAATGGTAACAGTAGTATGGTGTCTGAGAAGGTTGATGTATTCTCATTTGGAATCACAATGTGGGAGATATTGACTGGGGAGGAGCCATATGCTAACTTGCATTGCGGGGCTATAATAGGGGGAATTGTAAATAACACACTCAGGCCTTCTATTCCAAAGCGTTGTGATGCTGAATGGAAGAAGTTGATGGAAGATTGCTGGTCTGCTGACCCTTCAGCCAGACCATCTTTTACAGAAATTACAATTAGGCTCCGCAACATGTCGGCAGCACTCAAGAAAAAGTCACCTAATATTGCTATTAGATGA 3453 0.4107 MSNEVPGTPRQQWYERANIVGPRDRFPADGALYNICTQTGEEFSVEFLRDRVVSPRTAPVMRDVYHQQAKRFGHNRHVPYEDLNGVLGLQRMSSENGSDVIDFVPGIGYVAEAEKRSDPVNIIGYQRERGGSSGQLSSKFADDGWFSPGRGSPPIHTVELPRSCQCPGRVLSSSPSECSSSGKIKFLCSFGGKILPRPHDGKLRYVGGETRILSLSRSISFEDLTRKTCAIWNHHHTIKYQLPGEDLDALISVCSNEDLNLMIEEYQELERTEGSQRLRIFLISTSEPGSPASIEHRVSQPIDADLQYVVAVNGMLSSPRKSSCGHSLTSQTSQFGNASDCSPSFGRESPTAAYFPHMSSPFQLSGKSFNQPPPFSPVSIQQRDSKNITSPLYVNQSPHDCNKSSYPIVLENVSNENLSLMENTKSIDTVGHFNINNLTQGTSFMNYHPSNPYFAELDQHNQPFDMSYRNRSLSSEVTSSACGQFDLISESSITKDWPFHSDIPEEQSILLSESSDRDKFCSKMERSLADSLWKENDERSSSHGNGKGLTESSLNIWRPKSPPSTMSSTSPDWLLQFLQTADVKAHEDLHENLPTCITTDNRKGEFHQDGGNMNLTDKKKHWSDESGGNFRNLLEEINDVQNNYLPSDMHPLFTEIERPERKVSIPLEFPEESPRILMEQSHCFQLEMGNSDITIKRQNSMEDTGNGRSEIASSHQFSPRRTDFRPVAFNSSQEQLLPVSEAVSYATEREDSNRNEKTSTYGKSYDANGCDILCMRSPAIEPRQENDITSTVPSSLKIISRDDYDVDTEPPYSEQVDIDCLTANLESDYICKNQAANGTGKEIDRPFGDSELVEIEAGIYGLQTIKNADLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGKSSEQERLVKDFWREARLLSTLHHPNVVAFYGIVPDGPGGTLATVAEYMVNGSLRTVLLTKKVVLDRRKRLMIAMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDAERPICKVGDFDLSKIKHNTLVSGGVRGTLPWMAPELLNGNSSMVSEKVDVFSFGITMWEILTGEEPYANLHCGAIIGGIVNNTLRPSIPKRCDAEWKKLMEDCWSADPSARPSFTEITIRLRNMSAALKKKSPNIAIR* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01545 1150 CDD STKc_MAP3K-like 876 1133 - -
Pte11g01545 1150 Gene3D Transferase(Phosphotransferase) domain 1 958 1148 - -
Pte11g01545 1150 MobiDBLite consensus disorder prediction 532 569 - -
Pte11g01545 1150 MobiDBLite consensus disorder prediction 700 719 - -
Pte11g01545 1150 CDD PB1_UP2 187 283 - -
Pte11g01545 1150 Pfam Protein tyrosine and serine/threonine kinase 872 1131 IPR001245 GO:0004672|GO:0006468
Pte11g01545 1150 Gene3D - 202 285 - -
Pte11g01545 1150 ProSitePatterns Protein kinases ATP-binding region signature. 876 897 IPR017441 GO:0005524
Pte11g01545 1150 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 958 1148 - -
Pte11g01545 1150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Pte11g01545 1150 Pfam PB1 domain 199 282 IPR000270 GO:0005515
Pte11g01545 1150 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 863 957 - -
Pte11g01545 1150 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 203 285 - -
Pte11g01545 1150 ProSiteProfiles Protein kinase domain profile. 870 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01545 1150 Gene3D Phosphorylase Kinase; domain 1 863 957 - -
Pte11g01545 1150 PANTHER SERINE-THREONINE PROTEIN KINASE 237 1133 - -
Pte11g01545 1150 PRINTS Tyrosine kinase catalytic domain signature 952 965 IPR001245 GO:0004672|GO:0006468
Pte11g01545 1150 PRINTS Tyrosine kinase catalytic domain signature 1060 1082 IPR001245 GO:0004672|GO:0006468
Pte11g01545 1150 PRINTS Tyrosine kinase catalytic domain signature 989 1007 IPR001245 GO:0004672|GO:0006468
Pte11g01545 1150 PRINTS Tyrosine kinase catalytic domain signature 1104 1126 IPR001245 GO:0004672|GO:0006468
Pte11g01545 1150 SMART serkin_6 870 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte11g01545 1150 MobiDBLite consensus disorder prediction 545 569 - -
Pte11g01545 1150 SUPERFAMILY CAD & PB1 domains 199 286 - -
Pte11g01545 1150 SUPERFAMILY Protein kinase-like (PK-like) 862 1129 IPR011009 -
Pte11g01545 1150 SMART PB1_new 198 285 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01545 Pte-Chr11 33919251 33924644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01545 8 333 MAP Kinase Kinase Kinase AT1G16270 38.690 9.13e-44 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pte11g01545 PK_Tyr_Ser-Thr 1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01545 - - qsa:O6P43_022137 1054.66