Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01536 ATGGCTCCGAAGCAAAGAACTCCCAGGGTCAGCAGAAACCCTGATCTAATCAGAGGGGTTGGCAAGTATTCGAGGTCTAAGATGTATCACAAGAGGGGTCTCTGGGCAATCAAGGCGAAGAACGGCGGTGTCTTCCCTCACCATGAAGCAAAGACTAAGGCTGCCCCTCCAGCTGAGAAACCACCAAAGTTCTACCCAGCCGAGGATGTGAAGAAACCTCTTGTAAACAAACGCAAGCCCAAACCAACCAAGCTCAGGGCAAGCATTACCCCTGGTACTGTCCTTATCATTCTGGCTGGAAGGTTCATGGGAAAGAGAGTCGTGTTCCTCAAGCAGCTCCCATCTGGGTTGCTTTTGGTTACTGGCCCCTTCAAGATCAATGGTGTTCCCCTTAGACGTGTGAATCAATCTTACGTCATTGCTACGTCCACAAAGGTTGATGTATCTGGTGTCAGTTTGGACAAGTTTGATGATAAGTACTTCTCAAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAACAGGATAAGAAAACGCTCCCACAGGAGAAAAAGGATGATCAGAAATCTGTTGACACAGCATTATTAAAATCCATTGAGAGTGTGCCAGATTTGAAGGCATACCTTGGGGCTAGGTTCTCCTTGAAGTCTGGCATGAAGCCTCACGAGGAACAAGTTATGGCACGAACGGAGAATCTGGAATTAACTGCTGTGTAG 738 0.4715 MAPKQRTPRVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPHHEAKTKAAPPAEKPPKFYPAEDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDVSGVSLDKFDDKYFSKEVQKKKKKGEGEFFEAEKQDKKTLPQEKKDDQKSVDTALLKSIESVPDLKAYLGARFSLKSGMKPHEEQVMARTENLELTAV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01536 245 PANTHER 60S RIBOSOMAL PROTEIN L6 3 230 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pte11g01536 245 Gene3D - 87 171 IPR014722 -
Pte11g01536 245 FunFam 60S ribosomal protein L6 87 171 - -
Pte11g01536 245 MobiDBLite consensus disorder prediction 1 22 - -
Pte11g01536 245 CDD KOW_RPL6 81 230 IPR041997 -
Pte11g01536 245 SUPERFAMILY Translation proteins SH3-like domain 87 177 IPR008991 -
Pte11g01536 245 ProSitePatterns Ribosomal protein L6e signature. 127 145 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pte11g01536 245 Pfam Ribosomal protein L6, N-terminal domain 3 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pte11g01536 245 Pfam Ribosomal protein L6e 126 230 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01536 Pte-Chr11 33824518 33826941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01536 1 230 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 82.609 2.63e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01536 K02934 - zju:107408703 385.956