Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01535 ATGTGCGTATTCAACTATCATTTTGGGTCATTGGTTTTCTTATTTTTGCATCCAGGGAAGGTTCACGGTTCTCTAGCACGTGCTGGGAAGGTCAGAGGCCAAACACCCAAAGTGGCTAAACAGGACAAAAAGAAGAAACCCCGCGGTCGTGCACACAAGAGAATGCAGTACAATCGCAGATTCGTCACTGCAGTGGTTGGGCCTGGAAAGAAGAGGGGACCGAACTCATCTGAGAAGTAA 240 0.4792 MCVFNYHFGSLVFLFLHPGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGPGKKRGPNSSEK* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01535 79 Pfam Ribosomal protein S30 20 76 IPR006846 GO:0003735|GO:0005840|GO:0006412
Pte11g01535 79 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 16 79 - -
Pte11g01535 79 MobiDBLite consensus disorder prediction 29 56 - -
Pte11g01535 79 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01535 Pte-Chr11 33822388 33823748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01535 19 80 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 95.161 2.17e-27 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01535 K02983 - zju:107424007 114.005